RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 KLF6Q99612 283 aaPredicted RBP11.82□□□□□ -0.52
PTPN7-201ENST00000309017 LAMB2P55268 1798 aa11.82□□□□□ -0.52
PTPN7-201ENST00000309017 PIAS1O75925 651 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 RCN1Q15293 331 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 CCDC62Q6P9F0 684 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 C7orf43Q8WVR3 580 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 INPP5DQ92835 1189 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 ANKRD27Q96NW4 1050 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 DENND2DQ9H6A0 471 aaPredicted RBP11.81□□□□□ -0.52
PTPN7-201ENST00000309017 KIAA1586Q9HCI6 787 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 PI4KBQ9UBF8 816 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 SMG5Q9UPR3 1016 aaKnown RBP11.81□□□□□ -0.52
PTPN7-201ENST00000309017 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 PSMD10O75832 226 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 BBOX1O75936 387 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 SKIP12755 728 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 RFC5P40937 340 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 ARSEP51690 589 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 SNRNP35Q16560 246 aaKnown RBP11.81□□□□□ -0.52
PTPN7-201ENST00000309017 C15orf52Q6ZUT6 534 aaKnown RBP11.81□□□□□ -0.52
PTPN7-201ENST00000309017 TRABD2AQ86V40 505 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 CERS5Q8N5B7 392 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 PDCD7Q8N8D1 485 aaKnown RBP11.81□□□□□ -0.52
PTPN7-201ENST00000309017 TAS1R2Q8TE23 839 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 FIZ1Q96SL8 496 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 HERPUD2Q9BSE4 406 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 TRIM4Q9C037 500 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 DCLRE1BQ9H816 532 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 C1orf112Q9NSG2 853 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 LGALS13Q9UHV8 139 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 PRR12Q9ULL5 1215 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 MTA2O94776 668 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 HAUS5O94927 633 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 ZSCAN5DPP0CG00 497 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 KRT10P13645 584 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 KRT4P19013 534 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 PAPOLAP51003 745 aaKnown RBP11.81□□□□□ -0.52
PTPN7-201ENST00000309017 PDIA2Q13087 525 aaKnown RBP11.81□□□□□ -0.52
PTPN7-201ENST00000309017 TMEM179Q6ZVK1 233 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 SLC9A9Q8IVB4 645 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 RIBC1Q8N443 379 aaPredicted RBP11.81□□□□□ -0.52
PTPN7-201ENST00000309017 FBXL13Q8NEE6 735 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 CRYGNQ8WXF5 182 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 SEMA4DQ92854 862 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 FAM84AQ96KN4 292 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 GPRC5CQ9NQ84 441 aa11.81□□□□□ -0.52
PTPN7-201ENST00000309017 DDTLA6NHG4 134 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-201ENST00000309017 SNUPNO95149 360 aaKnown RBP11.8□□□□□ -0.52
PTPN7-201ENST00000309017 ASMTLO95671 621 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 LMNAP02545 664 aaKnown RBP11.8□□□□□ -0.52
PTPN7-201ENST00000309017 SERPINB2P05120 415 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 PTPN4P29074 926 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 STAT2P52630 851 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 NOP14P78316 857 aaKnown RBP11.8□□□□□ -0.52
PTPN7-201ENST00000309017 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
PTPN7-201ENST00000309017 USP37Q86T82 979 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 RHOT1Q8IXI2 618 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 ANKLE1Q8NAG6 615 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 POMGNT1Q8WZA1 660 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 SHC3Q92529 594 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 ACTL7BQ9Y614 415 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 IGLV3-22A0A075B6J6 115 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 SGK1O00141 431 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 EDF1O60869 148 aaKnown RBP11.8□□□□□ -0.52
PTPN7-201ENST00000309017 ADRB2P07550 413 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 IVDP26440 423 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 PIK3CAP42336 1068 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 CENPCQ03188 943 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 SLC1A5Q15758 541 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 WASHC2DQ5SRD0 308 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 KIFC3Q9BVG8 833 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 RAB20Q9NX57 234 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 KCND2Q9NZV8 630 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 IKBKGQ9Y6K9 419 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 MYH11P35749 1972 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 GM2AP17900 193 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 CRKP46108 304 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 PPP2R5CQ13362 524 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 FASTKD3Q14CZ7 662 aaKnown RBP11.8□□□□□ -0.52
PTPN7-201ENST00000309017 LMBRD2Q68DH5 695 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-201ENST00000309017 RBBP8NLQ8NC74 664 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-201ENST00000309017 TTC25Q96NG3 672 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 COA1Q9GZY4 146 aa11.8□□□□□ -0.52
PTPN7-201ENST00000309017 A0A1W2PPM1 405 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 TMEM150BA6NC51 233 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 E7ENQ6 273 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 CAPN9O14815 690 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 ESRRAP11474 423 aaPredicted RBP11.79□□□□□ -0.52
PTPN7-201ENST00000309017 VHLP40337 213 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 SLC1A1P43005 524 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 LMNB2Q03252 620 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 PDK4Q16654 411 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 CLEC16AQ2KHT3 1053 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 WDR44Q5JSH3 913 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 SNX30Q5VWJ9 437 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 CENPUQ71F23 418 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 OTOAQ7RTW8 1153 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTPN7-201ENST00000309017 DAW1Q8N136 415 aa11.79□□□□□ -0.52
PTPN7-201ENST00000309017 KCTD17Q8N5Z5 321 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms