RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 RNF19BQ6ZMZ0 732 aa16.08■□□□□ 0.17
LEMD3-201ENST00000308330 SFR1Q86XK3 245 aa16.08■□□□□ 0.17
LEMD3-201ENST00000308330 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.17
LEMD3-201ENST00000308330 TMEM260Q9NX78 707 aa16.08■□□□□ 0.17
LEMD3-201ENST00000308330 NYAP2Q9P242 653 aa16.08■□□□□ 0.17
LEMD3-201ENST00000308330 UPP2O95045 317 aa16.08■□□□□ 0.16
LEMD3-201ENST00000308330 MDM2Q00987 491 aaPredicted RBP16.08■□□□□ 0.16
LEMD3-201ENST00000308330 PCIF1Q9H4Z3 704 aa16.08■□□□□ 0.16
LEMD3-201ENST00000308330 TIMMDC1Q9NPL8 285 aa16.08■□□□□ 0.16
LEMD3-201ENST00000308330 LRRC4BQ9NT99 713 aa16.08■□□□□ 0.16
LEMD3-201ENST00000308330 S100A9P06702 114 aaKnown RBP16.08■□□□□ 0.16
LEMD3-201ENST00000308330 CYP2B6P20813 491 aa16.08■□□□□ 0.16
LEMD3-201ENST00000308330 THOC5Q13769 683 aaKnown RBP16.08■□□□□ 0.16
LEMD3-201ENST00000308330 PARK7Q99497 189 aaKnown RBP16.08■□□□□ 0.16
LEMD3-201ENST00000308330 MRPL1Q9BYD6 325 aaKnown RBP16.08■□□□□ 0.16
LEMD3-201ENST00000308330 ZFYVE28Q9HCC9 887 aa16.08■□□□□ 0.16
LEMD3-201ENST00000308330 CAPN11Q9UMQ6 739 aa16.08■□□□□ 0.16
LEMD3-201ENST00000308330 KIAA1210Q9ULL0 1709 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 CLIC2O15247 247 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 DLGAP3O95886 979 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 NAA20P61599 178 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 KRT31Q15323 416 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 TBC1D25Q3MII6 688 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 PCNX4Q63HM2 1172 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 MAP1SQ66K74 1059 aaPredicted RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 SGMS1Q86VZ5 419 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 GRAMD1CQ8IYS0 662 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 GIMAP8Q8ND71 665 aaPredicted RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 ACCSQ96QU6 501 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 AP4S1Q9Y587 144 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 PXDNQ92626 1479 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 TEX28O15482 410 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 CHEK2O96017 543 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 BAATQ14032 418 aaPredicted RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 TMED2Q15363 201 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 PRR23CQ6ZRP0 262 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 PPP4R1Q8TF05 950 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 DACH2Q96NX9 599 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 TUBGCP5Q96RT8 1024 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 PRPF18Q99633 342 aaKnown RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 PPARGC1AQ9UBK2 798 aaKnown RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 DOLKQ9UPQ8 538 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 POTEMA6NI47 508 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 COBLO75128 1261 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 VDRP11473 427 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 CA4P22748 312 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 RCAN1P53805 252 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 ZNF543Q08ER8 600 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 MRPL28Q13084 256 aaKnown RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 PTK2BQ14289 1009 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 LGSNQ5TDP6 509 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 LPCAT2Q7L5N7 544 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 ZBTB33Q86T24 672 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 ZFRQ96KR1 1074 aaKnown RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 SRPRBQ9Y5M8 271 aaKnown RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 DNALI1O14645 258 aaPredicted RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 RASA1P20936 1047 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 JAK3P52333 1124 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 SLC34A1Q06495 639 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 ARL6IP4Q66PJ3 421 aaKnown RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 NEK10Q6ZWH5 1172 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 SMYD4Q8IYR2 804 aaPredicted RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 CCDC89Q8N998 374 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 B3GALT6Q96L58 329 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 DEPDC7Q96QD5 511 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 SAMSN1Q9NSI8 373 aaKnown RBP16.07■□□□□ 0.16
LEMD3-201ENST00000308330 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
LEMD3-201ENST00000308330 WDR19Q8NEZ3 1342 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 ASB14A6NK59 587 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 PEX3P56589 373 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 GSTA3Q16772 222 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 NEK5Q6P3R8 708 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 GPR141Q7Z602 305 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 ZNF184Q99676 751 aaPredicted RBP16.06■□□□□ 0.16
LEMD3-201ENST00000308330 FAM53CQ9NYF3 392 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 CYP39A1Q9NYL5 469 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 DEFA1P59665 94 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 DEFA3P59666 94 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 MYBPC3Q14896 1274 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 STOX1Q6ZVD7 989 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 ADAT2Q7Z6V5 191 aaKnown RBP16.06■□□□□ 0.16
LEMD3-201ENST00000308330 PBKQ96KB5 322 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 SNX25Q9H3E2 840 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 FADS3Q9Y5Q0 445 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 ENO2P09104 434 aaPredicted RBP16.06■□□□□ 0.16
LEMD3-201ENST00000308330 CETPP11597 493 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 BRAFP15056 766 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 ADAM17P78536 824 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 COX4I2Q96KJ9 171 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 C8orf4Q9NR00 106 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 DCTN4Q9UJW0 460 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 TKTP29401 623 aaKnown RBP16.06■□□□□ 0.16
LEMD3-201ENST00000308330 PPP4CP60510 307 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 FKBP3Q00688 224 aaKnown RBP16.06■□□□□ 0.16
LEMD3-201ENST00000308330 CYP27A1Q02318 531 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 OXER1Q8TDS5 423 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 FAM167AQ96KS9 214 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 FAM20AQ96MK3 541 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 CEP44Q9C0F1 390 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 CCDC134Q9H6E4 229 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms