RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CHORDC1Q9UHD1 332 aaPredicted RBP23.86■■□□□ 1.41
SMAD1-201ENST00000302085 C17orf102A2RUQ5 167 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 CYP1A2P05177 515 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 HOXC8P31273 242 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 ZNF132P52740 706 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 GJA9P57773 515 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 PRKCZQ05513 592 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 TRIM32Q13049 653 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 NOGQ13253 232 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 ZNF699Q32M78 642 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 CATSPER4Q7RTX7 472 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 CXorf38Q8TB03 319 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 TAF4BQ92750 862 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 ACAP3Q96P50 834 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 PNKPQ96T60 521 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 ADPGKQ9BRR6 497 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 RNF14Q9UBS8 474 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 CFHP08603 1231 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 PAFAH1B1P43034 410 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 ITIH3Q06033 890 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 CCDC181Q5TID7 509 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 SPATA4Q8NEY3 305 aa23.85■■□□□ 1.41
SMAD1-201ENST00000302085 TRIP12Q14669 1992 aaPredicted RBP23.85■■□□□ 1.41
SMAD1-201ENST00000302085 MROH7Q68CQ1 1323 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 ATMINO43313 823 aaPredicted RBP23.84■■□□□ 1.41
SMAD1-201ENST00000302085 NPTXRO95502 500 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 CYP1A1P04798 512 aaPredicted RBP23.84■■□□□ 1.41
SMAD1-201ENST00000302085 GNA15P30679 374 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 GRM5P41594 1212 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 ASPAP45381 313 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 CFAP221Q4G0U5 840 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 GNASQ5JWF2 1037 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 C7orf31Q8N865 590 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 HES6Q96HZ4 224 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 AMFRQ9UKV5 643 aa23.84■■□□□ 1.41
SMAD1-201ENST00000302085 KCNK3O14649 394 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 KPNA6O60684 536 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 MTA2O94776 668 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 KRT19P08727 400 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 WEE2P0C1S8 567 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 DCAF4L1Q3SXM0 396 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 MMGT1Q8N4V1 131 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 TMEM40Q8WWA1 233 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 CPA5Q8WXQ8 436 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 CYFIP2Q96F07 1278 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 CISHQ9NSE2 258 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 ZNF446Q9NWS9 450 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 GTF3C4Q9UKN8 822 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 RAB21Q9UL25 225 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 POLIQ9UNA4 740 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 CES2O00748 559 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 CD58P19256 250 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 EIF4BP23588 611 aaKnown RBP23.83■■□□□ 1.41
SMAD1-201ENST00000302085 ZNF653Q96CK0 615 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 PBKQ96KB5 322 aa23.83■■□□□ 1.41
SMAD1-201ENST00000302085 CALR3Q96L12 384 aaKnown RBP23.83■■□□□ 1.41
SMAD1-201ENST00000302085 EIF2AQ9BY44 585 aaKnown RBP23.83■■□□□ 1.41
SMAD1-201ENST00000302085 UPF3AQ9H1J1 476 aaKnown RBP23.83■■□□□ 1.41
SMAD1-201ENST00000302085 PGK1P00558 417 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 SNX17Q15036 470 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 PCBP1Q15365 356 aaKnown RBP eCLIP23.82■■□□□ 1.4
SMAD1-201ENST00000302085 ARGLU1Q9NWB6 273 aaPredicted RBP23.82■■□□□ 1.4
SMAD1-201ENST00000302085 TOMM70O94826 608 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 ITGB3P05106 788 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 GNAT1P11488 350 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 SSTR3P32745 418 aaPredicted RBP23.82■■□□□ 1.4
SMAD1-201ENST00000302085 CACNB2Q08289 660 aaPredicted RBP23.82■■□□□ 1.4
SMAD1-201ENST00000302085 TMEM132DQ14C87 1099 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 NAA35Q5VZE5 725 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 SLC27A1Q6PCB7 646 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 SCARA5Q6ZMJ2 495 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 MCOLN2Q8IZK6 566 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 CAPNS2Q96L46 248 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 MTG1Q9BT17 334 aaPredicted RBP23.82■■□□□ 1.4
SMAD1-201ENST00000302085 NUP85Q9BW27 656 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 CXCL16Q9H2A7 254 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 NXF1Q9UBU9 619 aaKnown RBP23.82■■□□□ 1.4
SMAD1-201ENST00000302085 ALG6Q9Y672 507 aa23.82■■□□□ 1.4
SMAD1-201ENST00000302085 THAP12O43422 761 aa23.81■■□□□ 1.4
SMAD1-201ENST00000302085 GUCY2FP51841 1108 aa23.81■■□□□ 1.4
SMAD1-201ENST00000302085 DEFB115Q30KQ5 88 aa23.81■■□□□ 1.4
SMAD1-201ENST00000302085 C11orf63Q6NUN7 778 aa23.81■■□□□ 1.4
SMAD1-201ENST00000302085 CXCL17Q6UXB2 119 aa23.81■■□□□ 1.4
SMAD1-201ENST00000302085 NME8Q8N427 588 aa23.81■■□□□ 1.4
SMAD1-201ENST00000302085 ZNF606Q8WXB4 792 aa23.81■■□□□ 1.4
SMAD1-201ENST00000302085 CCDC94Q9BW85 323 aaPredicted RBP23.81■■□□□ 1.4
SMAD1-201ENST00000302085 PDCL3Q9H2J4 239 aa23.81■■□□□ 1.4
SMAD1-201ENST00000302085 DDX3YO15523 660 aaKnown RBP23.8■■□□□ 1.4
SMAD1-201ENST00000302085 SEPT4O43236 478 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 RNASE9P60153 205 aaKnown RBP23.8■■□□□ 1.4
SMAD1-201ENST00000302085 CENPCQ03188 943 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 ZNF667Q5HYK9 610 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 NOTUMQ6P988 496 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 TRIM72Q6ZMU5 477 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 APBB1IPQ7Z5R6 666 aaPredicted RBP23.8■■□□□ 1.4
SMAD1-201ENST00000302085 CD302Q8IX05 232 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 ZSWIM1Q9BR11 485 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 BCO2Q9BYV7 579 aa23.8■■□□□ 1.4
SMAD1-201ENST00000302085 RNF216Q9NWF9 866 aaPredicted RBP23.8■■□□□ 1.4
SMAD1-201ENST00000302085 RNF186Q9NXI6 227 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms