RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SMAD1Q15797 465 aaKnown RBP9.91□□□□□ -0.82
PRDM9-201ENST00000296682 DCAF12L1Q5VU92 463 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 EEF1DP3Q658K8 133 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 ACAD10Q6JQN1 1059 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 LBX2Q6XYB7 198 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 UBA3Q8TBC4 463 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 WHAMMQ8TF30 809 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 AFG1LQ8WV93 481 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 HEXIM2Q96MH2 286 aaKnown RBP9.91□□□□□ -0.82
PRDM9-201ENST00000296682 MCEEQ96PE7 176 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 ZSWIM1Q9BR11 485 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 FDXACB1Q9BRP7 624 aaPredicted RBP9.91□□□□□ -0.82
PRDM9-201ENST00000296682 MRPL4Q9BYD3 311 aaKnown RBP9.91□□□□□ -0.82
PRDM9-201ENST00000296682 TRIM6Q9C030 488 aaPredicted RBP9.91□□□□□ -0.82
PRDM9-201ENST00000296682 SAE1Q9UBE0 346 aaPredicted RBP9.91□□□□□ -0.82
PRDM9-201ENST00000296682 LCMT1Q9UIC8 334 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 INTUQ9ULD6 942 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 POLIQ9UNA4 740 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 A0A0A6YYK5 440 aaPredicted RBP9.91□□□□□ -0.82
PRDM9-201ENST00000296682 RARAP10276 462 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 RALAP11233 206 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 CUL2Q13617 745 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 KIF22Q14807 665 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 ALS2CLQ60I27 953 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 DNAJC24Q6P3W2 148 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 LRRC31Q6UY01 552 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 TAS1R3Q7RTX0 852 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 RNF169Q8NCN4 708 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 SLC17A8Q8NDX2 589 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 ACTRT1Q8TDG2 376 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 SHC3Q92529 594 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 CALN1Q9BXU9 219 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 ISCUQ9H1K1 167 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 RNPEPQ9H4A4 650 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 PCDHB2Q9Y5E7 798 aa9.91□□□□□ -0.82
PRDM9-201ENST00000296682 F5H423 210 aaPredicted RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 H0YCG3 227 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 RGS16O15492 202 aaPredicted RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 FARP2O94887 1054 aaPredicted RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 ECEL1O95672 775 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 VIMP08670 466 aaKnown RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 ADCYAP1R1P41586 468 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 RGS7P49802 495 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 HADHBP55084 474 aaKnown RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 RPL7AP62424 266 aaKnown RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 SLC29A2Q14542 456 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 LRRC14Q15048 493 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 UAP1Q16222 522 aaPredicted RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 DUOXA2Q1HG44 320 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 KIZQ2M2Z5 673 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 GPAT2Q6NUI2 795 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 ARMC9Q7Z3E5 817 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 ERICH1Q86X53 443 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 ERO1BQ86YB8 467 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 TMEM192Q8IY95 271 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 THOC1Q96FV9 657 aaKnown RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 C9orf72Q96LT7 481 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 SEMA4AQ9H3S1 761 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 RPF1Q9H9Y2 349 aaKnown RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 CHST7Q9NS84 486 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 KRT1P04264 644 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 EPHX2P34913 555 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 GPC3P51654 580 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 PLCB4Q15147 1175 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 LRRN4Q8WUT4 740 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 HES6Q96HZ4 224 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 ERP44Q9BS26 406 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 APOBEC3GQ9HC16 384 aaKnown RBP9.9□□□□□ -0.82
PRDM9-201ENST00000296682 HES2Q9Y543 173 aa9.9□□□□□ -0.82
PRDM9-201ENST00000296682 DYNC1LI2O43237 492 aaPredicted RBP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 INSRRP14616 1297 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 KRT17Q04695 432 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 ATF7IP2Q5U623 682 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 SCFD2Q8WU76 684 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 HSPH1Q92598 858 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 SH3GL2Q99962 352 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 GDF3Q9NR23 364 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 SYNGAP1Q96PV0 1343 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 DCDC2CA8MYV0 355 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 POC1B-GALNT4F8VUJ3 575 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 SHBGP04278 402 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 ITGB3P05106 788 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 IVLP07476 585 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 YARSP54577 528 aaKnown RBP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 BPIFB4P59827 614 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 TTLL4Q14679 1199 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 XRRA1Q6P2D8 792 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 METTL7BQ6UX53 244 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 SLC13A5Q86YT5 568 aaPredicted RBP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 PRELID2Q8N945 189 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 ZNF606Q8WXB4 792 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 SEC14L1Q92503 715 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 ANKRD36BP1Q96IX9 119 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 CARD9Q9H257 536 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 FAM114A2Q9NRY5 505 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 DDX3YO15523 660 aaKnown RBP9.89□□□□□ -0.83
PRDM9-201ENST00000296682 ADCY3O60266 1144 aa9.89□□□□□ -0.83
PRDM9-201ENST00000296682 LDHAP00338 332 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms