RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 URI1O94763 535 aaPredicted RBP12.58□□□□□ -0.4
SSRP1-201ENST00000278412 ASS1P00966 412 aaKnown RBP12.58□□□□□ -0.4
SSRP1-201ENST00000278412 ATP1A1P05023 1023 aaKnown RBP12.58□□□□□ -0.4
SSRP1-201ENST00000278412 CRYBB1P53674 252 aaPredicted RBP12.58□□□□□ -0.4
SSRP1-201ENST00000278412 CUL2Q13617 745 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 TWF2Q6IBS0 349 aaKnown RBP12.58□□□□□ -0.4
SSRP1-201ENST00000278412 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 TWNKQ96RR1 684 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.58□□□□□ -0.4
SSRP1-201ENST00000278412 OSGEPQ9NPF4 335 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 NENFQ9UMX5 172 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 PMM2O15305 246 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 CYP11B1P15538 503 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 FERP16591 822 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 ABCD1P33897 745 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 ASPAP45381 313 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 FMO1Q01740 532 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 WDR72Q3MJ13 1102 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 SLC27A1Q6PCB7 646 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 RNF180Q86T96 592 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 RNF169Q8NCN4 708 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 IQCDQ96DY2 449 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 TRIM6Q9C030 488 aaPredicted RBP12.58□□□□□ -0.4
SSRP1-201ENST00000278412 SMARCAL1Q9NZC9 954 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 PARP2Q9UGN5 583 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 IPPQ9Y573 584 aa12.58□□□□□ -0.4
SSRP1-201ENST00000278412 CST5P28325 142 aaPredicted RBP12.57□□□□□ -0.4
SSRP1-201ENST00000278412 MFAP3P55082 362 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 MGAT3Q09327 533 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 CCDC142Q17RM4 750 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 NOTUMQ6P988 496 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 DDX1Q92499 740 aaKnown RBP12.57□□□□□ -0.4
SSRP1-201ENST00000278412 AGPAT1Q99943 283 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 EHD2Q9NZN4 543 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 AGAP1Q9UPQ3 857 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 KIAA0391O15091 583 aaKnown RBP12.57□□□□□ -0.4
SSRP1-201ENST00000278412 ZNF185O15231 689 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 GALCP54803 685 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 NKX3-2P78367 333 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 TRIM71Q2Q1W2 868 aaKnown RBP12.57□□□□□ -0.4
SSRP1-201ENST00000278412 ZNF699Q32M78 642 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 WDR44Q5JSH3 913 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 KIF18AQ8NI77 898 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 ADPGKQ9BRR6 497 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 THAP2Q9H0W7 228 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 EPC1Q9H2F5 836 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 NOD1Q9Y239 953 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 NME7Q9Y5B8 376 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 PCDHB4Q9Y5E5 795 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 IPO7O95373 1038 aaKnown RBP12.57□□□□□ -0.4
SSRP1-201ENST00000278412 FTCDO95954 541 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 GNAT1P11488 350 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 CXCR5P32302 372 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 KRT83P78385 493 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 KIF5AQ12840 1032 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 LPIN1Q14693 890 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 TMEM132DQ14C87 1099 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 TAF2Q6P1X5 1199 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 USP37Q86T82 979 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 SLAIN1Q8ND83 568 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 DIS3LQ8TF46 1054 aaKnown RBP12.57□□□□□ -0.4
SSRP1-201ENST00000278412 SNX27Q96L92 541 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 RNF208Q9H0X6 261 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 NUCKS1Q9H1E3 243 aaKnown RBP12.57□□□□□ -0.4
SSRP1-201ENST00000278412 CHD7Q9P2D1 2997 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 PUF60Q9UHX1 559 aaKnown RBP12.57□□□□□ -0.4
SSRP1-201ENST00000278412 PADI3Q9ULW8 664 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 PTPN22Q9Y2R2 807 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 TRPV2Q9Y5S1 764 aa12.57□□□□□ -0.4
SSRP1-201ENST00000278412 CEP290O15078 2479 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 KIF5CO60282 957 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 GJB6O95452 261 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 BRD2P25440 801 aaKnown RBP12.56□□□□□ -0.4
SSRP1-201ENST00000278412 GRM5P41594 1212 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 NAP1L1P55209 391 aaKnown RBP12.56□□□□□ -0.4
SSRP1-201ENST00000278412 TRPC3Q13507 836 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 CPA5Q8WXQ8 436 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 TFAP2BQ92481 460 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 GLT1D1Q96MS3 346 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 PAAF1Q9BRP4 392 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 STARD7Q9NQZ5 370 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 WBP1LQ9NX94 342 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 MIOSQ9NXC5 875 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 COG5Q9UP83 839 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 F8W810 466 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 TNFAIP3P21580 790 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 SCP2P22307 547 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 CASQ1P31415 396 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 DAB2IPQ5VWQ8 1189 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 PCSK9Q8NBP7 692 aaKnown RBP12.56□□□□□ -0.4
SSRP1-201ENST00000278412 RBBP8NLQ8NC74 664 aaPredicted RBP12.56□□□□□ -0.4
SSRP1-201ENST00000278412 BTBD6Q96KE9 485 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 TRIM7Q9C029 511 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 CISHQ9NSE2 258 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 DPP3Q9NY33 737 aa12.56□□□□□ -0.4
SSRP1-201ENST00000278412 SPTLC1O15269 473 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 KPNA6O60684 536 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 TNNC2P02585 160 aa12.55□□□□□ -0.4
SSRP1-201ENST00000278412 MLH1P40692 756 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms