RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 DSG3P32926 999 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 PSMC1P62191 440 aaKnown RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 POLD3Q15054 466 aaPredicted RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 ATP6V0D2Q8N8Y2 350 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 EPB41L4AQ9HCS5 686 aaPredicted RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 SEL1LQ9UBV2 794 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 DDX20Q9UHI6 824 aaKnown RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 RCN2Q14257 317 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 CRYMQ14894 314 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 PFKFB3Q16875 520 aaPredicted RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 ANKS6Q68DC2 871 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 NAIF1Q69YI7 327 aaPredicted RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 TDRD5Q8NAT2 981 aaKnown RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 PPP1R2P1Q96PQ5 205 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 NLNQ9BYT8 704 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 DPH5Q9H2P9 285 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 CYP4F11Q9HBI6 524 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 MKL2Q9ULH7 1088 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 NHSL1Q5SYE7 1610 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 H0Y3Z8 333 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 MXI1P50539 228 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 SRSF11Q05519 484 aaKnown RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 PDCLQ13371 301 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 SCARA5Q6ZMJ2 495 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 OTOP3Q7RTS5 596 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 OR8K1Q8NGG5 319 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 TEKT4Q8WW24 435 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 ZBTB10Q96DT7 871 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 LRRC46Q96FV0 321 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 TINF2Q9BSI4 451 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 DCLK3Q9C098 648 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 EPS15L1Q9UBC2 864 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 PACSIN2Q9UNF0 486 aaPredicted RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 RIC1Q4ADV7 1423 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 SNUPNO95149 360 aaKnown RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 MMP1P03956 469 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 ICAM1P05362 532 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 MYL1P05976 194 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 CLTBP09497 229 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 TAF6P49848 677 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 SKP1P63208 163 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 PFKPQ01813 784 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 VGLL4Q14135 290 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 CTTNQ14247 550 aaKnown RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 GRAMD1BQ3KR37 738 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 C6orf118Q5T5N4 469 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 THEMIS2Q5TEJ8 643 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 LRRC69Q6ZNQ3 347 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 VGLL2Q8N8G2 317 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 B3GALNT2Q8NCR0 500 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 ACER1Q8TDN7 264 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 LRGUKQ96M69 825 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 SH3GL2Q99962 352 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP3-201ENST00000268049 ASAH2Q9NR71 780 aa8.24□□□□□ -1.09
USP3-201ENST00000268049 DDX28Q9NUL7 540 aaKnown RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 DDX56Q9NY93 547 aaKnown RBP8.24□□□□□ -1.09
USP3-201ENST00000268049 RHOBTB3O94955 611 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 TGFB3P10600 412 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 CTSEP14091 401 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 AARSP49588 968 aaKnown RBP eCLIP8.23□□□□□ -1.09
USP3-201ENST00000268049 USP11P51784 963 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 TBCCQ15814 346 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 LLGL2Q6P1M3 1020 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 ARHGEF18Q6ZSZ5 1173 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 SRRM1Q8IYB3 904 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 SLC35F6Q8N357 371 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 GJA10Q969M2 543 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 PPP1R16AQ96I34 528 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 FAM210AQ96ND0 272 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 ATXN3LQ9H3M9 355 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 ECT2Q9H8V3 914 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 RHBDL2Q9NX52 303 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 WTIPA6NIX2 430 aaPredicted RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 KCNK3O14649 394 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 SPTLC1O15269 473 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 SPAG7O75391 227 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 HSPA8P11142 646 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 EEF1B2P24534 225 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 CCL23P55773 120 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 WDR75Q8IWA0 830 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 RSPH1Q8WYR4 309 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 UROC1Q96N76 676 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 NUDCD1Q96RS6 583 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 KIAA1683Q9H0B3 1180 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 TMEM260Q9NX78 707 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 SETD1AO15047 1707 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 CFAP73A6NFT4 308 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 PHF20L1A8MW92 1017 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 TTC4O95801 387 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 GLUD1P00367 558 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 ERVK-10P10266 1014 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 KRT3P12035 628 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 PPP4R3CPQ6ZMV5 832 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 FRA10AC1Q70Z53 315 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 LRP10Q7Z4F1 713 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 PATL1Q86TB9 770 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 MYLK4Q86YV6 388 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms