RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 FGFR4P22455 802 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 ARL2P36404 184 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 EIF3BP55884 814 aaKnown RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 SNX1Q13596 522 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 CUL2Q13617 745 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 NOL9Q5SY16 702 aaKnown RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 DAB2IPQ5VWQ8 1189 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 HOOK3Q86VS8 718 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 C12orf50Q8NA57 414 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 UHMK1Q8TAS1 419 aaKnown RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 CYFIP2Q96F07 1278 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 CGRRF1Q99675 332 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 C11orf70Q9BRQ4 267 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 PABPC3Q9H361 631 aaKnown RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 AVENQ9NQS1 362 aaPredicted RBP13.76□□□□□ -0.21
CPSF6-201ENST00000266679 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 FBXO40Q9UH90 709 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 STYXL1Q9Y6J8 313 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 A0A0G2JMZ2 1700 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 LRRC37A2A6NM11 1700 aa13.76□□□□□ -0.21
CPSF6-201ENST00000266679 CCDC85CA6NKD9 419 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 ATG7O95352 703 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 ECEL1O95672 775 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 ACO1P21399 889 aaKnown RBP13.75□□□□□ -0.21
CPSF6-201ENST00000266679 GBP1P32455 592 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 ICAM3P32942 547 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 MAGEA9P43362 315 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 FNTAP49354 379 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 PPP1R7Q15435 360 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 SGO2Q562F6 1265 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 ZNF677Q86XU0 584 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 CHST13Q8NET6 341 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 MYCBPAPQ8TBZ2 947 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 TRIM11Q96F44 468 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 RUNDC3BQ96NL0 473 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 SAGE1Q9NXZ1 904 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 PPP2R3BQ9Y5P8 575 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 USP2O75604 605 aaPredicted RBP13.75□□□□□ -0.21
CPSF6-201ENST00000266679 PIGRP01833 764 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 NUDT17P0C025 328 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 MYBL1P10243 752 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 BPIFB4P59827 614 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 CENPCQ03188 943 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 CAPSQ13938 189 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 TMEM270Q6UE05 265 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 CCDC25Q86WR0 208 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 DNERQ8NFT8 737 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 OR5B17Q8NGF7 314 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.21
CPSF6-201ENST00000266679 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 ATG4AQ8WYN0 398 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 CCT8L2Q96SF2 557 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 PCYT2Q99447 389 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 PLVAPQ9BX97 442 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 R3HDMLQ9H3Y0 253 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 BTBD7Q9P203 1132 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 KCNG1Q9UIX4 513 aa13.75□□□□□ -0.21
CPSF6-201ENST00000266679 GSTTP1A0A1W2PQM5 241 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 TLDC2A0PJX2 215 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 FSCN2O14926 492 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 CYP1A1P04798 512 aaPredicted RBP13.74□□□□□ -0.21
CPSF6-201ENST00000266679 CLTAP09496 248 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 GNA15P30679 374 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 GJA5P36382 358 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 GJC1P36383 396 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 NOP14P78316 857 aaKnown RBP13.74□□□□□ -0.21
CPSF6-201ENST00000266679 KRT17Q04695 432 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 SLFN12LQ6IEE8 588 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 MON1BQ7L1V2 547 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 RBBP8NLQ8NC74 664 aaPredicted RBP13.74□□□□□ -0.21
CPSF6-201ENST00000266679 TLCD1Q96CP7 247 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 HERPUD2Q9BSE4 406 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 SEMA4AQ9H3S1 761 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 AZI2Q9H6S1 392 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 SNCAIPQ9Y6H5 919 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 MKI67P46013 3256 aaKnown RBP13.74□□□□□ -0.21
CPSF6-201ENST00000266679 A0A0B4J269 797 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 THAP12O43422 761 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 FARP2O94887 1054 aaPredicted RBP13.74□□□□□ -0.21
CPSF6-201ENST00000266679 DRP2Q13474 957 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 VGLL4Q14135 290 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 SLC29A2Q14542 456 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 SCARA3Q6AZY7 606 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 ZBTB33Q86T24 672 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 ART4Q93070 314 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 SLC10A4Q96EP9 437 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 NIFKQ9BYG3 293 aaKnown RBP13.74□□□□□ -0.21
CPSF6-201ENST00000266679 LRRC19Q9H756 370 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 ELP3Q9H9T3 547 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 CHST7Q9NS84 486 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 NUB1Q9Y5A7 615 aa13.74□□□□□ -0.21
CPSF6-201ENST00000266679 CNTNAP2Q9UHC6 1331 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 O00370 1275 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 GJB6O95452 261 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 LDHAP00338 332 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms