RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 NFICP08651 508 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 AMHR2Q16671 573 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 SCYL2Q6P3W7 929 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 FBXO38Q6PIJ6 1188 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 C17orf99Q6UX52 265 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 MMS22LQ6ZRQ5 1243 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 CCDC105Q8IYK2 499 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 EPS8L1Q8TE68 723 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 BORCS6Q96GS4 357 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 A8MXQ7 604 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 HUS1O60921 280 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 KIF4AO95239 1232 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 RDXP35241 583 aaKnown RBP9.94□□□□□ -0.82
SSR3-201ENST00000265044 RNASELQ05823 741 aaKnown RBP9.94□□□□□ -0.82
SSR3-201ENST00000265044 PPP1R7Q15435 360 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 NBPF20Q3BBV1 942 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 KAZNQ674X7 775 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 SLC27A1Q6PCB7 646 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 CD99L2Q8TCZ2 262 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 GABRQQ9UN88 632 aa9.94□□□□□ -0.82
SSR3-201ENST00000265044 M0QYV0 167 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 DUSP11O75319 330 aaKnown RBP9.93□□□□□ -0.82
SSR3-201ENST00000265044 SEC31AO94979 1220 aaKnown RBP9.93□□□□□ -0.82
SSR3-201ENST00000265044 PDGFRBP09619 1106 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 YY1P25490 414 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 MBTD1Q05BQ5 628 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 DCAF4L1Q3SXM0 396 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 OR6B2Q6IFH4 312 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 TAF2Q6P1X5 1199 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 DSTYKQ6XUX3 929 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 ABI1Q8IZP0 508 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 PCSK9Q8NBP7 692 aaKnown RBP9.93□□□□□ -0.82
SSR3-201ENST00000265044 SHC3Q92529 594 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 PBKQ96KB5 322 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 BTBD6Q96KE9 485 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 FAM193BQ96PV7 902 aaPredicted RBP9.93□□□□□ -0.82
SSR3-201ENST00000265044 FECHP22830 423 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 GUCY2DQ02846 1103 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 MCL1Q07820 350 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 TSHZ1Q6ZSZ6 1077 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 TPCN2Q8NHX9 752 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 LNX1Q8TBB1 728 aaPredicted RBP9.93□□□□□ -0.82
SSR3-201ENST00000265044 FAM149B1Q96BN6 582 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 FZD8Q9H461 694 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 FLRT1Q9NZU1 646 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 POLIQ9UNA4 740 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 TRIM17Q9Y577 477 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 ALG6Q9Y672 507 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 A6NJR5 290 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 KPNA6O60684 536 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 RNF8O76064 485 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 GHRP10912 638 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 MAATS1Q7Z4T9 603 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 IFT20Q8IY31 132 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 TMEM192Q8IY95 271 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 FAM71AQ8IYT1 594 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 NOA1Q8NC60 698 aaKnown RBP9.93□□□□□ -0.82
SSR3-201ENST00000265044 SPATA4Q8NEY3 305 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 ZNF516Q92618 1163 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 FBXL18Q96ME1 805 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 ASB7Q9H672 318 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 FAM49BQ9NUQ9 324 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 RNF14Q9UBS8 474 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 RASAL2Q9UJF2 1139 aa9.93□□□□□ -0.82
SSR3-201ENST00000265044 MCM3APO60318 1980 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 GOLGA6L10A6NI86 522 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 C4BPAP04003 597 aaKnown RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 ACAD10Q6JQN1 1059 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 TRIM72Q6ZMU5 477 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 PALB2Q86YC2 1186 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 HELQQ8TDG4 1101 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 BRCA1P38398 1863 aaKnown RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 COL1A2P08123 1366 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 GRID2IPA4D2P6 1211 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 RECQL4O94761 1208 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 ASGR1P07306 291 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 ITGA4P13612 1032 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 GTF2F1P35269 517 aaKnown RBP eCLIP9.92□□□□□ -0.82
SSR3-201ENST00000265044 CLCN6P51797 869 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 SNX16P57768 344 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 IFRD2Q12894 506 aaPredicted RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 SGO2Q562F6 1265 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 C1orf131Q8NDD1 294 aaKnown RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 ZNF606Q8WXB4 792 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 MAGOHBQ96A72 148 aaKnown RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 DPH5Q9H2P9 285 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 INTUQ9ULD6 942 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 UTP11Q9Y3A2 253 aaKnown RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 SCINQ9Y6U3 715 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 SBF1O95248 1867 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 RRP9O43818 475 aaKnown RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 GZMAP12544 262 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 RRM1P23921 792 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 PSMC1P62191 440 aaKnown RBP9.92□□□□□ -0.82
SSR3-201ENST00000265044 PTGISQ16647 500 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.823e-9■■■■■ 29
SSR3-201ENST00000265044 ARHGEF26Q96DR7 871 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 EPB41L5Q9HCM4 733 aa9.92□□□□□ -0.82
SSR3-201ENST00000265044 ZCCHC17Q9NP64 241 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms