RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DIS3LQ8TF46 1054 aaKnown RBP12.66□□□□□ -0.38
SMG6-201ENST00000263073 KIF12Q96FN5 646 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 FAM20AQ96MK3 541 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 THAP2Q9H0W7 228 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 RNPEPQ9H4A4 650 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 RERGLQ9H628 205 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 SCAF8Q9UPN6 1271 aaKnown RBP12.66□□□□□ -0.38
SMG6-201ENST00000263073 CDHR2Q9BYE9 1310 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 H0Y626 953 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 BBOX1O75936 387 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 TRIM16O95361 564 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 CCDC15Q0P6D6 951 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 STK33Q9BYT3 514 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 CAPN6Q9Y6Q1 641 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 DNAL1Q4LDG9 190 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 DAB2IPQ5VWQ8 1189 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 CDR2LQ86X02 465 aaPredicted RBP12.66□□□□□ -0.38
SMG6-201ENST00000263073 ARID3BQ8IVW6 561 aaPredicted RBP12.66□□□□□ -0.38
SMG6-201ENST00000263073 MCPH1Q8NEM0 835 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 ERP44Q9BS26 406 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 EML4Q9HC35 981 aaKnown RBP12.66□□□□□ -0.38
SMG6-201ENST00000263073 FAM49BQ9NUQ9 324 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 PSD3Q9NYI0 1048 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 ALG6Q9Y672 507 aa12.66□□□□□ -0.38
SMG6-201ENST00000263073 NUDT2P50583 147 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 TBL3Q12788 808 aaKnown RBP12.65□□□□□ -0.38
SMG6-201ENST00000263073 ORC1Q13415 861 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 PWP1Q13610 501 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 STXBP2Q15833 593 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 SGO1Q5FBB7 561 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 PLA2G4FQ68DD2 849 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 RCOR2Q8IZ40 523 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 HEY2Q9UBP5 337 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 ERVV-1B6SEH8 477 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 KRT75O95678 551 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 DSG1Q02413 1049 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 SLC10A5Q5PT55 438 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 SGMS1Q86VZ5 419 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 ZNF786Q8N393 782 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 EXOSC4Q9NPD3 245 aaKnown RBP12.65□□□□□ -0.38
SMG6-201ENST00000263073 ZHX2Q9Y6X8 837 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 PFASO15067 1338 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 SRP72O76094 671 aaKnown RBP12.65□□□□□ -0.38
SMG6-201ENST00000263073 RALAP11233 206 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 CIITAP33076 1130 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 VHLP40337 213 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 UBA3Q8TBC4 463 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 NEUROG2Q9H2A3 272 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 TLR2O60603 784 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 HMBSP08397 361 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 OR9Q1Q8NGQ5 310 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 MKNK1Q9BUB5 465 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
SMG6-201ENST00000263073 ALDH8A1Q9H2A2 487 aaPredicted RBP12.65□□□□□ -0.38
SMG6-201ENST00000263073 POLR1AO95602 1720 aaPredicted RBP12.65□□□□□ -0.38
SMG6-201ENST00000263073 EFCAB6Q5THR3 1501 aa12.65□□□□□ -0.39
SMG6-201ENST00000263073 RHOBTB3O94955 611 aa12.65□□□□□ -0.39
SMG6-201ENST00000263073 TRAF7Q6Q0C0 670 aa12.65□□□□□ -0.39
SMG6-201ENST00000263073 TMCO5AQ8N6Q1 288 aa12.65□□□□□ -0.39
SMG6-201ENST00000263073 KIF1BO60333 1816 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 GJC2Q5T442 439 aaPredicted RBP12.64□□□□□ -0.39
SMG6-201ENST00000263073 ELMO3Q96BJ8 720 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 CARD9Q9H257 536 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 KIAA1586Q9HCI6 787 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 CD209Q9NNX6 404 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 LCMT1Q9UIC8 334 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 CDYLQ9Y232 598 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 DEAF1O75398 565 aaPredicted RBP12.64□□□□□ -0.39
SMG6-201ENST00000263073 MYL2P10916 166 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 GNAT1P11488 350 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 PAX7P23759 505 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 ABCD1P33897 745 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 COILP38432 576 aaPredicted RBP12.64□□□□□ -0.39
SMG6-201ENST00000263073 MIER2Q8N344 545 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 C17orf80Q9BSJ5 609 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 RNF146Q9NTX7 359 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 PDXKO00764 312 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 PARNO95453 639 aaKnown RBP12.64□□□□□ -0.39
SMG6-201ENST00000263073 PDGFRAP16234 1089 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 CYLC2Q14093 348 aaPredicted RBP12.64□□□□□ -0.39
SMG6-201ENST00000263073 THEMIS2Q5TEJ8 643 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 KDM7AQ6ZMT4 941 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 CATSPER1Q8NEC5 780 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 WNK4Q96J92 1243 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 VCPKMTQ9H867 229 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 ZSCAN5CA6NGD5 496 aaPredicted RBP12.64□□□□□ -0.39
SMG6-201ENST00000263073 TBC1D4O60343 1298 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 PPARGP37231 505 aaPredicted RBP12.64□□□□□ -0.39
SMG6-201ENST00000263073 CCNA1P78396 465 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 MMGT1Q8N4V1 131 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 RNF149Q8NC42 400 aa12.64□□□□□ -0.39
SMG6-201ENST00000263073 ANKS1AQ92625 1134 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms