RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PLEKHG4Q58EX7 1191 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 SLC25A41Q8N5S1 370 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 RFWD2Q8NHY2 731 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 SNF8Q96H20 258 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 LRRC37BQ96QE4 947 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 RXFP1Q9HBX9 757 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 COL20A1Q9P218 1284 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 CCDC195A0A1B0GUA6 201 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 KITP10721 976 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 CHRNA5P30532 468 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 RFC5P40937 340 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 MMP14P50281 582 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 IRX4P78413 519 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 GPS1Q13098 491 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 BMT2Q1RMZ1 405 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 GALNTL6Q49A17 601 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 EIF1ADQ8N9N8 165 aaKnown RBP13.79□□□□□ -0.2
SNX1-201ENST00000261889 PHC3Q8NDX5 983 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 PSPC1Q8WXF1 523 aaKnown RBP13.79□□□□□ -0.2
SNX1-201ENST00000261889 CD101Q93033 1021 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 BICD1Q96G01 975 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 NAF1Q96HR8 494 aaKnown RBP13.79□□□□□ -0.2
SNX1-201ENST00000261889 DENND2DQ9H6A0 471 aaPredicted RBP13.79□□□□□ -0.2
SNX1-201ENST00000261889 ZHX2Q9Y6X8 837 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 A0A1B0GVG6 124 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 H0YIN7 160 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 NOVP48745 357 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 Q4G0T1 1027 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 CEP55Q53EZ4 464 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 ARHGAP27Q6ZUM4 889 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 XXYLT1Q8NBI6 393 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 FAM20AQ96MK3 541 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 CYTH2Q99418 400 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 TRABDQ9H4I3 376 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 ARHGEF3Q9NR81 526 aa13.79□□□□□ -0.2
SNX1-201ENST00000261889 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
SNX1-201ENST00000261889 KRT36O76013 467 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 PECAM1P16284 738 aaPredicted RBP13.78□□□□□ -0.2
SNX1-201ENST00000261889 MAGEA4P43358 317 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 KHDC1Q4VXA5 237 aaKnown RBP13.78□□□□□ -0.2
SNX1-201ENST00000261889 C3orf20Q8ND61 904 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 JDP2Q8WYK2 163 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 TRIM56Q9BRZ2 755 aaKnown RBP13.78□□□□□ -0.2
SNX1-201ENST00000261889 SHCBP1LQ9BZQ2 653 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 DLGAP2Q9P1A6 1054 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 SLC17A7Q9P2U7 560 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 UMODL1Q5DID0 1318 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 MIF4GDA9UHW6 222 aaKnown RBP13.78□□□□□ -0.2
SNX1-201ENST00000261889 ATP9AO75110 1047 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 UNC5CO95185 931 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 DPEP1P16444 411 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 KRT4P19013 534 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 CETN1Q12798 172 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 XKR9Q5GH70 373 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 DPH6Q7L8W6 267 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 LRRC6Q86X45 466 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 TBC1D22AQ8WUA7 517 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 CLPTM1LQ96KA5 538 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 SYT15Q9BQS2 421 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 MAK16Q9BXY0 300 aaKnown RBP13.78□□□□□ -0.2
SNX1-201ENST00000261889 DCLK3Q9C098 648 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 KIAA1586Q9HCI6 787 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 MROH7Q68CQ1 1323 aa13.78□□□□□ -0.2
SNX1-201ENST00000261889 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.77□□□□□ -0.2
SNX1-201ENST00000261889 GAP43P17677 238 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 DSG3P32926 999 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 AP3B2Q13367 1082 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 ZBTB41Q5SVQ8 909 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 FBF1Q8TES7 1133 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 ZNF483Q8TF39 744 aaPredicted RBP13.77□□□□□ -0.2
SNX1-201ENST00000261889 CNKSR1Q969H4 720 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 PRMT6Q96LA8 375 aaPredicted RBP13.77□□□□□ -0.2
SNX1-201ENST00000261889 KCNH7Q9NS40 1196 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 DMAC2Q9NW81 257 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 FZD1Q9UP38 647 aa13.77□□□□□ -0.2
SNX1-201ENST00000261889 TESPA1A2RU30 521 aaPredicted RBP13.77□□□□□ -0.21
SNX1-201ENST00000261889 CFAP73A6NFT4 308 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 PEX11AO75192 247 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 POLR2MP0CAP2 368 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 UBTFL6P0CB48 400 aaPredicted RBP13.77□□□□□ -0.21
SNX1-201ENST00000261889 CHRM1P11229 460 aaPredicted RBP13.77□□□□□ -0.21
SNX1-201ENST00000261889 PTDSS1P48651 473 aaKnown RBP13.77□□□□□ -0.21
SNX1-201ENST00000261889 ARSEP51690 589 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 CCDC6Q16204 474 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 MAPK6Q16659 721 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 FBXO27Q8NI29 283 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 PTPRN2Q92932 1015 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 NACC1Q96RE7 527 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 WNT8AQ9H1J5 351 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 TCEAL9Q9UHQ7 104 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 E2F8A0AVK6 867 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 GTPBP10A4D1E9 387 aaKnown RBP13.77□□□□□ -0.21
SNX1-201ENST00000261889 SMNDC1O75940 238 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNX1-201ENST00000261889 ZCCHC18P0CG32 403 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 T-ENOLP0DO92 83 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 FDX1P10109 184 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 ALAS1P13196 640 aa13.77□□□□□ -0.21
SNX1-201ENST00000261889 STAT2P52630 851 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms