RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TTC39CQ8N584 583 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 WEE2P0C1S8 567 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 TAF1CQ15572 869 aaPredicted RBP12.71□□□□□ -0.37
COL8A1-201ENST00000261037 SLC7A14Q8TBB6 771 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 ZC3H15Q8WU90 426 aaKnown RBP12.71□□□□□ -0.37
COL8A1-201ENST00000261037 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
COL8A1-201ENST00000261037 RAB6BQ9NRW1 208 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 ARHGEF38Q9NXL2 777 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 PIK3C2BO00750 1634 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 ARHGAP10A1A4S6 786 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 SUPT3HB4E1H0 165 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 STXBP3O00186 592 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 SUPT3HO75486 399 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 CYTH1Q15438 398 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 ADNPQ9H2P0 1102 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 PTPRMP28827 1452 aa12.71□□□□□ -0.37
COL8A1-201ENST00000261037 C3orf70A6NLC5 250 aaPredicted RBP12.71□□□□□ -0.38
COL8A1-201ENST00000261037 ZNF157P51786 506 aaPredicted RBP12.71□□□□□ -0.38
COL8A1-201ENST00000261037 GTF2H3Q13889 308 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 KRT72Q14CN4 511 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 LRRC36Q1X8D7 754 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 SNX31Q8N9S9 440 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 STOML1Q9UBI4 398 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 CHMP2BQ9UQN3 213 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 PSMD14O00487 310 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 ANGPT2O15123 496 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 UBE3AQ05086 875 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 RRM2BQ7LG56 351 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 DTX3LQ8TDB6 740 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 DDX50Q9BQ39 737 aaKnown RBP12.71□□□□□ -0.38
COL8A1-201ENST00000261037 STK33Q9BYT3 514 aa12.71□□□□□ -0.38
COL8A1-201ENST00000261037 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.38
COL8A1-201ENST00000261037 PGM1P36871 562 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 USP10Q14694 798 aaKnown RBP12.7□□□□□ -0.38
COL8A1-201ENST00000261037 MGAT5BQ3V5L5 792 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 ANKS3Q6ZW76 656 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 SPATA21Q7Z572 469 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 KCNF1Q9H3M0 494 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 TASP1Q9H6P5 420 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 PCDHGB4Q9UN71 923 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 MYO1GB0I1T2 1018 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 GH1P01241 217 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 PDIA5Q14554 519 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 XKR3Q5GH77 459 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 PKN3Q6P5Z2 889 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 KCNV1Q6PIU1 500 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 C11orf74Q86VG3 221 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 ZNF280CQ8ND82 737 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 IGDCC4Q8TDY8 1250 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 PTPRN2Q92932 1015 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 ABHD8Q96I13 439 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 KDM4CQ9H3R0 1056 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 ZC3H7BQ9UGR2 993 aaKnown RBP12.7□□□□□ -0.38
COL8A1-201ENST00000261037 PRR12Q9ULL5 1215 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 SNX12Q9UMY4 172 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 KBTBD13C9JR72 458 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 NPTXRO95502 500 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 AMHR2Q16671 573 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 LONP2Q86WA8 852 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 PGBD3Q8N328 593 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 C9orf72Q96LT7 481 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 KLF6Q99612 283 aaPredicted RBP12.7□□□□□ -0.38
COL8A1-201ENST00000261037 SMARCAD1Q9H4L7 1026 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 C20orf96Q9NUD7 363 aaPredicted RBP12.7□□□□□ -0.38
COL8A1-201ENST00000261037 KIDINS220Q9ULH0 1771 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 CCDC22O60826 627 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 ARIH2O95376 493 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 BRD2P25440 801 aaKnown RBP12.7□□□□□ -0.38
COL8A1-201ENST00000261037 LRRC74AQ0VAA2 488 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 ORC1Q13415 861 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 HIC1Q14526 733 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 STAT4Q14765 748 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 ANO5Q75V66 913 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 WDR48Q8TAF3 677 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 TRIM62Q9BVG3 475 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 ALDH8A1Q9H2A2 487 aaPredicted RBP12.7□□□□□ -0.38
COL8A1-201ENST00000261037 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.7□□□□□ -0.38
COL8A1-201ENST00000261037 CD274Q9NZQ7 290 aa12.7□□□□□ -0.38
COL8A1-201ENST00000261037 PRRG1O14668 218 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 DGAT1O75907 488 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 UCHL3P15374 230 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 SLC9A1P19634 815 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 KCNJ6P48051 423 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 EFCAB12Q6NXP0 572 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 TMED8Q6PL24 325 aaPredicted RBP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 RBM15Q96T37 977 aaKnown RBP eCLIP12.69□□□□□ -0.38
COL8A1-201ENST00000261037 TFR2Q9UP52 801 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 TRAF3IP3Q9Y228 551 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 RPS6KA5O75582 802 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 ITGA4P13612 1032 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 ATF7IP2Q5U623 682 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 ADSSL1Q8N142 457 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 C7orf25Q9BPX7 421 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 TSSK1BQ9BXA7 367 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 TMEM39BQ9GZU3 492 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 NEU2Q9Y3R4 380 aa12.69□□□□□ -0.38
COL8A1-201ENST00000261037 DGKIO75912 1065 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms