RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 SCYL1Q96KG9 808 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 STN1Q9H668 368 aaKnown RBP9.74□□□□□ -0.85
PDE6A-201ENST00000255266 MID2Q9UJV3 735 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 NAGPAQ9UK23 515 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 GIT1Q9Y2X7 761 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 MYL4P12829 197 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 PPP6R3Q5H9R7 873 aaPredicted RBP9.74□□□□□ -0.85
PDE6A-201ENST00000255266 NOMO2Q5JPE7 1267 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 HINFPQ9BQA5 517 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 C11orf70Q9BRQ4 267 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 CYP4F11Q9HBI6 524 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 ANAPC7Q9UJX3 599 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 ZNF197O14709 1029 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 COBLO75128 1261 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 VDRP11473 427 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 KCNA4P22459 653 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 CCL23P55773 120 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 KCNA10Q16322 511 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 HHATQ5VTY9 493 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 SHC4Q6S5L8 630 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 TBC1D19Q8N5T2 526 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 SLC7A14Q8TBB6 771 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 STK33Q9BYT3 514 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 DCLK3Q9C098 648 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDE6A-201ENST00000255266 FAM114A2Q9NRY5 505 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 SAMSN1Q9NSI8 373 aaKnown RBP9.74□□□□□ -0.85
PDE6A-201ENST00000255266 PCDHA13Q9Y5I0 950 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 POLR3GO15318 223 aaPredicted RBP9.74□□□□□ -0.85
PDE6A-201ENST00000255266 CHGBP05060 677 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 OVOS1Q6IE37 1185 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 ANKS3Q6ZW76 656 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 LRRC8DQ7L1W4 858 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 PASD1Q8IV76 773 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 UNC45BQ8IWX7 931 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 BRI3BPQ8WY22 251 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 NUDCD1Q96RS6 583 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 TRIM31Q9BZY9 425 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 PLIN4Q96Q06 1357 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 A0A1W2PQC6 194 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 SMIM23A6NLE4 172 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 SYNCRIPO60506 623 aaKnown RBP9.74□□□□□ -0.85
PDE6A-201ENST00000255266 RTN2O75298 545 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 NDUFV1P49821 464 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 TSTA3Q13630 321 aaPredicted RBP9.74□□□□□ -0.85
PDE6A-201ENST00000255266 SAGE1Q9NXZ1 904 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 CACNA1FO60840 1977 aa9.74□□□□□ -0.85
PDE6A-201ENST00000255266 TTLL13PA6NNM8 815 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 MED24O75448 989 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 F9P00740 461 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 SLC4A1P02730 911 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 RHOXF2BP0C7M4 288 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 TRIM49P0CI25 452 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 TRIM49CP0CI26 452 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 ACADMP11310 421 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 MX2P20592 715 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 DPYDQ12882 1025 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 FBXO47Q5MNV8 452 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 FAM171A1Q5VUB5 890 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 RHOXF2Q9BQY4 288 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 RUSC1Q9BVN2 902 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 PPP2R2CQ9Y2T4 447 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 NHSQ6T4R5 1651 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 CLTBP09497 229 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 KRT15P19012 456 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 GEMIN4P57678 1058 aaKnown RBP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 DEUP1Q05D60 604 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 CDH18Q13634 790 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 USP41Q3LFD5 358 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 FBXO46Q6PJ61 603 aaPredicted RBP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 VSTM4Q8IW00 320 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 RIN2Q8WYP3 895 aaPredicted RBP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 F5H5T6 163 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 PGRMC1O00264 195 aaKnown RBP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 APOL1O14791 398 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 AP1G2O75843 785 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 RPL9P32969 192 aaKnown RBP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 SMARCB1Q12824 385 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 ZNF177Q13360 481 aaPredicted RBP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 ARHGEF7Q14155 803 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 IQCB1Q15051 598 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 TRAPPC11Q7Z392 1133 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 IL17RAQ96F46 866 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 AGPAT1Q99943 283 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 SLC7A5P2Q9GIP4 190 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 TMEM60Q9H2L4 133 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 LAMB4A4D0S4 1761 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 SCN11AQ9UI33 1791 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 CKMP06732 381 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 BCAT1P54687 386 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 YWHAGP61981 247 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 DYNLT1P63172 113 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 RBM10P98175 930 aaKnown RBP9.73□□□□□ -0.85
PDE6A-201ENST00000255266 PKP1Q13835 747 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 OTOP1Q7RTM1 612 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 SIK2Q9H0K1 926 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 SNTG2Q9NY99 539 aa9.73□□□□□ -0.85
PDE6A-201ENST00000255266 CYP3A7-CYP3A51PA0A087WV96 503 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms