RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ARL8AQ96BM9 186 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 TSPAN17Q96FV3 270 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 TMEM117Q9H0C3 514 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 TMEM8AQ9HCN3 771 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 MLXIPLQ9NP71 852 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 MYMKA6NI61 221 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 KCNA2P16389 499 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 GPD1P21695 349 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 ARFIP2P53365 341 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 LRRC8EQ6NSJ5 796 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 MFN1Q8IWA4 741 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 SNX31Q8N9S9 440 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 AGBL3Q8NEM8 1001 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 MAP3K14Q99558 947 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 TRIM9Q9C026 710 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 ARHGEF38Q9NXL2 777 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 NDE1Q9NXR1 346 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 SCAF8Q9UPN6 1271 aaKnown RBP9.16□□□□□ -0.94
PTCD3-201ENST00000254630 TARSL2A2RTX5 802 aaKnown RBP9.16□□□□□ -0.94
PTCD3-201ENST00000254630 SYNDIG1LA6NDD5 238 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 C3orf70A6NLC5 250 aaPredicted RBP9.16□□□□□ -0.94
PTCD3-201ENST00000254630 RHOBTB3O94955 611 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 SRGNP10124 158 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 HSPA9P38646 679 aaKnown RBP9.16□□□□□ -0.94
PTCD3-201ENST00000254630 ZC2HC1CQ53FD0 456 aaPredicted RBP9.16□□□□□ -0.94
PTCD3-201ENST00000254630 MS4A14Q96JA4 679 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 TYK2P29597 1187 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 RGS2P41220 211 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 FXR2P51116 673 aaKnown RBP eCLIP9.16□□□□□ -0.94
PTCD3-201ENST00000254630 SPDYE7PQ495Y7 208 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 FOPNLQ96NB1 174 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 TAAR1Q96RJ0 339 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 UVRAGQ9P2Y5 699 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 CYP2C9P11712 490 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 MTHFD1LQ6UB35 978 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 RNF180Q86T96 592 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 ATL2Q8NHH9 583 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 UBA3Q8TBC4 463 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 PPP1R36Q96LQ0 422 aa9.16□□□□□ -0.94
PTCD3-201ENST00000254630 GPBP1L1Q9HC44 474 aaPredicted RBP9.16□□□□□ -0.94
PTCD3-201ENST00000254630 NRXN1Q9ULB1 1477 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 SYCE1LA8MT33 242 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 HLA-DRAP01903 254 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 AKT1P31749 480 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 ALDH1A3P47895 512 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 AP2B1P63010 937 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 PCSK7Q16549 785 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 TDRD10Q5VZ19 366 aaKnown RBP9.15□□□□□ -0.94
PTCD3-201ENST00000254630 XRRA1Q6P2D8 792 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 ANKRD13AQ8IZ07 590 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 NT5C1AQ9BXI3 368 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 SENP1Q9P0U3 644 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 DCTN4Q9UJW0 460 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 ICAM1P05362 532 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 HMOX2P30519 316 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 KRT72Q14CN4 511 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 SAMD7Q7Z3H4 446 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 GPRASP2Q96D09 838 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 ATP6V1G3Q96LB4 118 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 SRPK1Q96SB4 655 aaKnown RBP9.15□□□□□ -0.94
PTCD3-201ENST00000254630 PRMT1Q99873 361 aaKnown RBP9.15□□□□□ -0.94
PTCD3-201ENST00000254630 SH2D3AQ9BRG2 576 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 DPP3Q9NY33 737 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 FBXL5Q9UKA1 691 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 ESYT3A0FGR9 886 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 SUPT3HB4E1H0 165 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 FOXP2O15409 715 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 SUPT3HO75486 399 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 SERPIND1P05546 499 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 GYS2P54840 703 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 FMR1Q06787 632 aaKnown RBP eCLIP9.15□□□□□ -0.94
PTCD3-201ENST00000254630 ARHGEF7Q14155 803 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 ADSSL1Q8N142 457 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 SLC25A41Q8N5S1 370 aa9.15□□□□□ -0.94
PTCD3-201ENST00000254630 PRMT7Q9NVM4 692 aaPredicted RBP9.15□□□□□ -0.94
PTCD3-201ENST00000254630 H7C4K7 107 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 ZNF185O15231 689 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 LRG1P02750 347 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 BRAFP15056 766 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 CUL3Q13618 768 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 STAT4Q14765 748 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 SDE2Q6IQ49 451 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 NLRP14Q86W24 1093 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 TRIML2Q8N7C3 387 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 RDM1Q8NG50 284 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 SCFD1Q8WVM8 642 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 AGLP35573 1532 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 MEFVO15553 781 aaPredicted RBP9.15□□□□□ -0.95
PTCD3-201ENST00000254630 PDGFRAP16234 1089 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 GNL1P36915 607 aaPredicted RBP9.15□□□□□ -0.95
PTCD3-201ENST00000254630 SESN2P58004 480 aaPredicted RBP9.15□□□□□ -0.95
PTCD3-201ENST00000254630 LRRC14Q15048 493 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 FAM117BQ6P1L5 589 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 AGR3Q8TD06 166 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 AGAP3Q96P47 875 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 DEFB129Q9H1M3 183 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 NSMCE4AQ9NXX6 385 aa9.15□□□□□ -0.95
PTCD3-201ENST00000254630 MAP2P11137 1827 aaKnown RBP9.14□□□□□ -0.95
PTCD3-201ENST00000254630 NWD1Q149M9 1564 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms