RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 MXI1P50539 228 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 RBP5P82980 135 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 MIIPQ5JXC2 388 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 PPP2R2DQ66LE6 453 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 APTXQ7Z2E3 356 aaKnown RBP15.22■□□□□ 0.03
VPS25-201ENST00000253794 LUZP1Q86V48 1076 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 C3orf58Q8NDZ4 430 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 IGSF21Q96ID5 467 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 FAM84AQ96KN4 292 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 TUBGCP2Q9BSJ2 902 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 COLEC11Q9BWP8 271 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 SLC28A3Q9HAS3 691 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 SPG21Q9NZD8 308 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 LZTS1Q9Y250 596 aa15.22■□□□□ 0.03
VPS25-201ENST00000253794 GTPBP10A4D1E9 387 aaKnown RBP15.21■□□□□ 0.03
VPS25-201ENST00000253794 PPEF2O14830 753 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 KIF4AO95239 1232 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 POLR2BP30876 1174 aaKnown RBP15.21■□□□□ 0.03
VPS25-201ENST00000253794 ATICP31939 592 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 MTIF2P46199 727 aaKnown RBP15.21■□□□□ 0.03
VPS25-201ENST00000253794 UBE3AQ05086 875 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 KCNH2Q12809 1159 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 KRT31Q15323 416 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 CBWD6Q4V339 395 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 EPC2Q52LR7 807 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 DCAF17Q5H9S7 520 aaPredicted RBP15.21■□□□□ 0.03
VPS25-201ENST00000253794 CBWD3Q5JTY5 395 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 CBWD5Q5RIA9 395 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 GPR153Q6NV75 609 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 TMEM173Q86WV6 379 aaPredicted RBP15.21■□□□□ 0.03
VPS25-201ENST00000253794 GPR65Q8IYL9 337 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 BCL7CQ8WUZ0 217 aaPredicted RBP15.21■□□□□ 0.03
VPS25-201ENST00000253794 TAF4BQ92750 862 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 FAXDC2Q96IV6 333 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 ZNF560Q96MR9 790 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 C17orf80Q9BSJ5 609 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 C11orf84Q9BUA3 381 aaPredicted RBP15.21■□□□□ 0.03
VPS25-201ENST00000253794 XYLT2Q9H1B5 865 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 ADAM28Q9UKQ2 775 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 TRANK1O15050 2925 aa15.21■□□□□ 0.03
VPS25-201ENST00000253794 F8W810 466 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 H3BNC9 293 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 M0QZQ0 153 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 FGF18O76093 207 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 B3GAT3O94766 335 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 CST3P01034 146 aaPredicted RBP15.2■□□□□ 0.02
VPS25-201ENST00000253794 ITGB1P05556 798 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 CTNNB1P35222 781 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 PBX3P40426 434 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 TAF6P49848 677 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 LILRA4P59901 499 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 TPM4P67936 248 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 ELAVL2Q12926 359 aaKnown RBP15.2■□□□□ 0.02
VPS25-201ENST00000253794 NCOA4Q13772 614 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 VWA3BQ502W6 1294 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 SPOUT1Q5T280 376 aaKnown RBP15.2■□□□□ 0.02
VPS25-201ENST00000253794 LIMS2Q7Z4I7 341 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 DDX53Q86TM3 631 aaKnown RBP15.2■□□□□ 0.02
VPS25-201ENST00000253794 TMEM130Q8N3G9 435 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 FBXL13Q8NEE6 735 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 ANKRD20A12PQ8NF67 263 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 TAS1R2Q8TE23 839 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 TMEM169Q96HH4 297 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 SUSD3Q96L08 255 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 NDST4Q9H3R1 872 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 GDAP2Q9NXN4 497 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 CACNG4Q9UBN1 327 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 AGAP1Q9UPQ3 857 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 PRG3Q9Y2Y8 225 aaPredicted RBP15.2■□□□□ 0.02
VPS25-201ENST00000253794 NLRC5Q86WI3 1866 aa15.2■□□□□ 0.02
VPS25-201ENST00000253794 SF3B1O75533 1304 aaKnown RBP eCLIP15.19■□□□□ 0.025e-6■■■■■ 54.6
VPS25-201ENST00000253794 NT5C1B-RDH14C9J2C7 533 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 GOLGA6L19H0YKK7 550 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 SOX1O00570 391 aaPredicted RBP15.19■□□□□ 0.02
VPS25-201ENST00000253794 SPTLC1O15269 473 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 TRAPPC3O43617 180 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 ASS1P00966 412 aaKnown RBP15.19■□□□□ 0.02
VPS25-201ENST00000253794 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 ATP1A3P13637 1013 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 IGFBP6P24592 240 aaPredicted RBP15.19■□□□□ 0.02
VPS25-201ENST00000253794 MYL7Q01449 175 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 MYO1EQ12965 1108 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 BIRC3Q13489 604 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 SV2CQ496J9 727 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 HSP90AA4PQ58FG1 418 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 SCARA3Q6AZY7 606 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 FUT10Q6P4F1 479 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 SPRED2Q7Z698 418 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 KLHL23Q8NBE8 558 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 RAB20Q9NX57 234 aa15.19■□□□□ 0.02
VPS25-201ENST00000253794 SYN3O14994 580 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 PHACTR2O75167 634 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 TADA2AO75478 443 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 SOD2P04179 222 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 FAM163BP0C2L3 166 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 COPB1P53618 953 aaKnown RBP15.18■□□□□ 0.02
VPS25-201ENST00000253794 CETN1Q12798 172 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 TRPC3Q13507 836 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms