RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 RHOXF2Q9BQY4 288 aa14.38□□□□□ -0.11
NUP85-201ENST00000245544 PARD6BQ9BYG5 372 aa14.38□□□□□ -0.11
NUP85-201ENST00000245544 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
NUP85-201ENST00000245544 POLIQ9UNA4 740 aa14.38□□□□□ -0.11
NUP85-201ENST00000245544 CNTN6Q9UQ52 1028 aa14.38□□□□□ -0.11
NUP85-201ENST00000245544 HES2Q9Y543 173 aa14.38□□□□□ -0.11
NUP85-201ENST00000245544 TBXAS1P24557 533 aaPredicted RBP14.37□□□□□ -0.11
NUP85-201ENST00000245544 CCND3P30281 292 aaPredicted RBP14.37□□□□□ -0.11
NUP85-201ENST00000245544 GJA9P57773 515 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 GPC5P78333 572 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 C2orf54Q08AI8 447 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 IFI16Q16666 785 aaKnown RBP14.37□□□□□ -0.11
NUP85-201ENST00000245544 DEFB115Q30KQ5 88 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 ZNF699Q32M78 642 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 ZNF394Q53GI3 561 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 C2CD6Q53TS8 623 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 C7orf31Q8N865 590 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 CPA5Q8WXQ8 436 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 PNKPQ96T60 521 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 RNF19AQ9NV58 838 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 STXBP5LQ9Y2K9 1186 aa14.37□□□□□ -0.11
NUP85-201ENST00000245544 MROH7Q68CQ1 1323 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 KIF4AO95239 1232 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 ITGB3P05106 788 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 UNGP13051 313 aaPredicted RBP14.36□□□□□ -0.11
NUP85-201ENST00000245544 EIF4BP23588 611 aaKnown RBP14.36□□□□□ -0.11
NUP85-201ENST00000245544 GNA15P30679 374 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 HOXC8P31273 242 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 ASPAP45381 313 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 RNASE9P60153 205 aaKnown RBP14.36□□□□□ -0.11
NUP85-201ENST00000245544 NT5DC3Q86UY8 548 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 PASD1Q8IV76 773 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 CYFIP2Q96F07 1278 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 ACAP3Q96P50 834 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 NIF3L1Q9GZT8 377 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 CISHQ9NSE2 258 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 SNTG2Q9NY99 539 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 CTTNBP2NLQ9P2B4 639 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 NXF1Q9UBU9 619 aaKnown RBP14.36□□□□□ -0.11
NUP85-201ENST00000245544 TSKSQ9UJT2 592 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 SCN10AQ9Y5Y9 1956 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 KCNK3O14649 394 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 RAP1GAPP47736 663 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 ZNF132P52740 706 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 SP3Q02447 781 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 CKAP4Q07065 602 aaKnown RBP14.36□□□□□ -0.11
NUP85-201ENST00000245544 SNX17Q15036 470 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 RPS6KA1Q15418 735 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 NBPF20Q3BBV1 942 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 ACAD10Q6JQN1 1059 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 LLGL2Q6P1M3 1020 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 PEX26Q7Z412 305 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 PHLDB2Q86SQ0 1253 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 BTBD6Q96KE9 485 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 ZSWIM1Q9BR11 485 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 ADPGKQ9BRR6 497 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 KATNAL1Q9BW62 490 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 ABCB6Q9NP58 842 aa14.36□□□□□ -0.11
NUP85-201ENST00000245544 TRPA1O75762 1119 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
NUP85-201ENST00000245544 CLCN6P51797 869 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 CDH8P55286 799 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 MRPS25P82663 173 aaKnown RBP14.35□□□□□ -0.11
NUP85-201ENST00000245544 CPNE8Q86YQ8 564 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 WNT8BQ93098 351 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 ZNF653Q96CK0 615 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 ZMAT2Q96NC0 199 aaKnown RBP14.35□□□□□ -0.11
NUP85-201ENST00000245544 ASB7Q9H672 318 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 SEPT4O43236 478 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 THAP12O43422 761 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 ADAMTS4O75173 837 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 CYP1A1P04798 512 aaPredicted RBP14.35□□□□□ -0.11
NUP85-201ENST00000245544 CYP1A2P05177 515 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 PRKAR2AP13861 404 aaKnown RBP14.35□□□□□ -0.11
NUP85-201ENST00000245544 GRM5P41594 1212 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 BPIFB4P59827 614 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 CDC42EP1Q00587 391 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 TMEM132DQ14C87 1099 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 WDR72Q3MJ13 1102 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 NAA35Q5VZE5 725 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 SLC27A1Q6PCB7 646 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 ZNF572Q7Z3I7 529 aaPredicted RBP14.35□□□□□ -0.11
NUP85-201ENST00000245544 SPATA4Q8NEY3 305 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 SDCBP2Q9H190 292 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 UPF3AQ9H1J1 476 aaKnown RBP14.35□□□□□ -0.11
NUP85-201ENST00000245544 ZNF446Q9NWS9 450 aa14.35□□□□□ -0.11
NUP85-201ENST00000245544 RARBP10826 455 aa14.34□□□□□ -0.11
NUP85-201ENST00000245544 POLR2BP30876 1174 aaKnown RBP14.34□□□□□ -0.11
NUP85-201ENST00000245544 GDF6Q6KF10 455 aaPredicted RBP14.34□□□□□ -0.11
NUP85-201ENST00000245544 ZNF677Q86XU0 584 aa14.34□□□□□ -0.11
NUP85-201ENST00000245544 RHOT2Q8IXI1 618 aa14.34□□□□□ -0.11
NUP85-201ENST00000245544 MSANTD4Q8NCY6 345 aa14.34□□□□□ -0.11
NUP85-201ENST00000245544 HES6Q96HZ4 224 aa14.34□□□□□ -0.11
NUP85-201ENST00000245544 MTG1Q9BT17 334 aaPredicted RBP14.34□□□□□ -0.11
NUP85-201ENST00000245544 NUP85Q9BW27 656 aa14.34□□□□□ -0.11
NUP85-201ENST00000245544 NXF3Q9H4D5 531 aaKnown RBP14.34□□□□□ -0.11
NUP85-201ENST00000245544 PIN4Q9Y237 131 aaKnown RBP14.34□□□□□ -0.11
NUP85-201ENST00000245544 TMEM110-MUSTN1A8MSY1 372 aa14.33□□□□□ -0.11
NUP85-201ENST00000245544 AKAP5P24588 427 aa14.33□□□□□ -0.11
NUP85-201ENST00000245544 BRD2P25440 801 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms