RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 LNX1Q8TBB1 728 aaPredicted RBP19.97■□□□□ 0.79
SNX17-201ENST00000233575 ARMC5Q96C12 935 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 ZFP42Q96MM3 310 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 LACRTQ9GZZ8 138 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 POLIQ9UNA4 740 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 SMIM28A0A1B0GU29 152 aa19.96■□□□□ 0.79
SNX17-201ENST00000233575 DDX3XO00571 662 aaKnown RBP eCLIP19.96■□□□□ 0.791e-10■■■□□ 17.5
SNX17-201ENST00000233575 KRT5P13647 590 aa19.96■□□□□ 0.79
SNX17-201ENST00000233575 ZSCAN20P17040 1043 aaPredicted RBP19.96■□□□□ 0.79
SNX17-201ENST00000233575 IBSPP21815 317 aaPredicted RBP19.96■□□□□ 0.79
SNX17-201ENST00000233575 DSC3Q14574 896 aa19.96■□□□□ 0.79
SNX17-201ENST00000233575 SPA17Q15506 151 aa19.96■□□□□ 0.79
SNX17-201ENST00000233575 PTPN14Q15678 1187 aa19.96■□□□□ 0.79
SNX17-201ENST00000233575 SCARA5Q6ZMJ2 495 aa19.96■□□□□ 0.79
SNX17-201ENST00000233575 AGAP1Q9UPQ3 857 aa19.96■□□□□ 0.79
SNX17-201ENST00000233575 PCDHA13Q9Y5I0 950 aa19.96■□□□□ 0.79
SNX17-201ENST00000233575 PPEF2O14830 753 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 OFD1O75665 1012 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 IPO7O95373 1038 aaKnown RBP19.95■□□□□ 0.78
SNX17-201ENST00000233575 AFF1P51825 1210 aaKnown RBP19.95■□□□□ 0.78
SNX17-201ENST00000233575 KRT83P78385 493 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 XKR4Q5GH76 650 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 NOP9Q86U38 636 aaKnown RBP19.95■□□□□ 0.78
SNX17-201ENST00000233575 PALB2Q86YC2 1186 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 NT5DC4Q86YG4 428 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 GLYCTKQ8IVS8 523 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 EPS8L1Q8TE68 723 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 IFIH1Q9BYX4 1025 aaKnown RBP19.95■□□□□ 0.78
SNX17-201ENST00000233575 NIF3L1Q9GZT8 377 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 NXF1Q9UBU9 619 aaKnown RBP19.95■□□□□ 0.78
SNX17-201ENST00000233575 SCN1AP35498 2009 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 TNNT1P13805 278 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 ASPAP45381 313 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 LRRC8DQ7L1W4 858 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 KIAA1328Q86T90 577 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 ADAM2Q99965 735 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 DERAQ9Y315 318 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 DUSP10Q9Y6W6 482 aa19.95■□□□□ 0.78
SNX17-201ENST00000233575 PTGESO14684 152 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 SOX4Q06945 474 aaPredicted RBP19.94■□□□□ 0.78
SNX17-201ENST00000233575 GPNMBQ14956 572 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 WDR72Q3MJ13 1102 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 DNTTIP2Q5QJE6 756 aaKnown RBP19.94■□□□□ 0.78
SNX17-201ENST00000233575 TAF3Q5VWG9 929 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 SLC39A5Q6ZMH5 540 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 CAGE1Q8TC20 777 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 PACSIN1Q9BY11 444 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 GOLGA2P5Q9HBQ8 144 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 NOCTQ9UK39 431 aaKnown RBP19.94■□□□□ 0.78
SNX17-201ENST00000233575 ITGA11Q9UKX5 1188 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 SQORQ9Y6N5 450 aa19.94■□□□□ 0.78
SNX17-201ENST00000233575 WEE2P0C1S8 567 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 CCDC172P0C7W6 258 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 CYP11B1P15538 503 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 SELPP16109 830 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 CD58P19256 250 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 TBXAS1P24557 533 aaPredicted RBP19.93■□□□□ 0.78
SNX17-201ENST00000233575 MLH1P40692 756 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 MAGEA1P43355 309 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 RAP1GAPP47736 663 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 CTCFP49711 727 aaPredicted RBP19.93■□□□□ 0.78
SNX17-201ENST00000233575 VAV2P52735 878 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 TMEM270Q6UE05 265 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 UBR7Q8N806 425 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 USP38Q8NB14 1042 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 GSTCDQ8NEC7 633 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 SLC30A5Q8TAD4 765 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 FAM81BQ96LP2 452 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 NAGPAQ9UK23 515 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 NENFQ9UMX5 172 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 PCDHB4Q9Y5E5 795 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 FANCGO15287 622 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 ITGA4P13612 1032 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 KCNE1P15382 129 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 ATF7P17544 494 aaPredicted RBP19.93■□□□□ 0.78
SNX17-201ENST00000233575 CHRNB2P17787 502 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 ARHGAP29Q52LW3 1261 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 AGMOQ6ZNB7 445 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 FMNL3Q8IVF7 1028 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 JAKMIP2Q96AA8 810 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 HPDLQ96IR7 371 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 GAD1Q99259 594 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 AGPAT1Q99943 283 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 SEZ6LQ9BYH1 1024 aa19.93■□□□□ 0.78
SNX17-201ENST00000233575 GOLGA6L9A6NEM1 432 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 NBNO60934 754 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 RBP5P82980 135 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 BMS1Q14692 1282 aaKnown RBP19.92■□□□□ 0.78
SNX17-201ENST00000233575 TRIM60Q495X7 471 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 ZNF667Q5HYK9 610 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 RTN4RL1Q86UN2 441 aaPredicted RBP19.92■□□□□ 0.78
SNX17-201ENST00000233575 RPUSD2Q8IZ73 545 aaKnown RBP19.92■□□□□ 0.78
SNX17-201ENST00000233575 RNF169Q8NCN4 708 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 SDCBP2Q9H190 292 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 SEPT11Q9NVA2 429 aaKnown RBP19.92■□□□□ 0.78
SNX17-201ENST00000233575 UBQLN1Q9UMX0 589 aaKnown RBP19.92■□□□□ 0.78
SNX17-201ENST00000233575 KIAA0100Q14667 2235 aaKnown RBP19.92■□□□□ 0.78
SNX17-201ENST00000233575 A0A0U1RQF3 1178 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 MMEP08473 750 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 COL6A1P12109 1028 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms