RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ZNF394Q53GI3 561 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 PDXDC1Q6P996 788 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 SCARA5Q6ZMJ2 495 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 FBXL13Q8NEE6 735 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 TMEM117Q9H0C3 514 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 KIAA1586Q9HCI6 787 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 DMAC2Q9NW81 257 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 NRCAMQ92823 1304 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 PTPRFP10586 1907 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 TLDC2A0PJX2 215 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 ZBTB42B2RXF5 422 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 DUSP11O75319 330 aaKnown RBP12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 CD58P19256 250 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 ABCB4P21439 1286 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 PAX7P23759 505 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 TWF2Q6IBS0 349 aaKnown RBP12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 RPAINQ86UA6 219 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 KIAA0319LQ8IZA0 1049 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 MMGT1Q8N4V1 131 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 CASKIN2Q8WXE0 1202 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 ST6GALNAC4Q9H4F1 302 aa12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 PRMT7Q9NVM4 692 aaPredicted RBP12.52□□□□□ -0.4
TNFAIP1-201ENST00000226225 ANO9A1A5B4 782 aa12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 GBP2P32456 591 aaPredicted RBP12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 PTENP60484 403 aa12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 QPCTQ16769 361 aa12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 EMBQ6PCB8 327 aa12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 CPLX4Q7Z7G2 160 aa12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 SH3TC2Q8TF17 1288 aa12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 U2AF1L4Q8WU68 220 aaKnown RBP12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 SRRDQ9UH36 339 aa12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 HES2Q9Y543 173 aa12.52□□□□□ -0.41
TNFAIP1-201ENST00000226225 ACKR2O00590 384 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 SEPT4O43236 478 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 ASGR1P07306 291 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 TCP1P17987 556 aaKnown RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 TNFAIP3P21580 790 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 CTNNA1P35221 906 aaKnown RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 PSEN1P49768 467 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 MDM1Q8TC05 714 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 ZNF296Q8WUU4 475 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 KAT5Q92993 513 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 NOX5Q96PH1 765 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 TLR10Q9BXR5 811 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 CCDC113Q9H0I3 377 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 NUCKS1Q9H1E3 243 aaKnown RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 DPH5Q9H2P9 285 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 RAB20Q9NX57 234 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 APEX2Q9UBZ4 518 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 PLAGL2Q9UPG8 496 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 GNEQ9Y223 722 aaKnown RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 KCNK3O14649 394 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 FKTNO75072 461 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 CXCL8P10145 99 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 SSTR3P32745 418 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 FNTAP49354 379 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 PAK2Q13177 524 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 SPOPLQ6IQ16 392 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 IQCDQ96DY2 449 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 HHIPL1Q96JK4 782 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 TSGA10Q9BZW7 698 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 NOVA2Q9UNW9 492 aaKnown RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 RBM47A0AV96 593 aaKnown RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 OGTO15294 1046 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 CEP104O60308 925 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 TNNC2P02585 160 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 MDH1P40925 334 aaKnown RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 MARSP56192 900 aaKnown RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 KCNA10Q16322 511 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 RNF180Q86T96 592 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 CCDC170Q8IYT3 715 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 TRPV1Q8NER1 839 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 CYFIP2Q96F07 1278 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 ACO2Q99798 780 aaKnown RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 MTG1Q9BT17 334 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 STRA6Q9BX79 667 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 PACSIN1Q9BY11 444 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 MTMR12Q9C0I1 747 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 KIAA1217Q5T5P2 1943 aa12.51□□□□□ -0.41
TNFAIP1-201ENST00000226225 MYH9P35579 1960 aaKnown RBP12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 CHUKO15111 745 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 ELF1P32519 619 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 THPOP40225 353 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 PEX19P40855 299 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 GLRA4Q5JXX5 417 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 MPZL3Q6UWV2 235 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 PLEKHO2Q8TD55 490 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 DOCK5Q9H7D0 1870 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 DCDC2CA8MYV0 355 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 RAD51CO43502 376 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 GPC3P51654 580 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 GSCP56915 257 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 SNRPFP62306 86 aaKnown RBP12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 MYBPC2Q14324 1141 aa12.5□□□□□ -0.41
TNFAIP1-201ENST00000226225 MEA1Q16626 185 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms