RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 NCKAP1LP55160 1127 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 P3H1Q32P28 736 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 CCDC91Q7Z6B0 441 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 BSNDQ8WZ55 320 aa15.88■□□□□ 0.13
UBE2D4-201ENST00000222402 DHX15O43143 795 aaKnown RBP15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 GJB6O95452 261 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 CDR2LQ86X02 465 aaPredicted RBP15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 RHPN2Q8IUC4 686 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 FBF1Q8TES7 1133 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 PSPC1Q8WXF1 523 aaKnown RBP15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 MCEEQ96PE7 176 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 SMC6Q96SB8 1091 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 RIPK2O43353 540 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 OATP04181 439 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 KRT10P13645 584 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 HNRNPH1P31943 449 aaKnown RBP15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 ARSEP51690 589 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 PPP1R2P3Q6NXS1 205 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 RFX6Q8HWS3 928 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 P3H4Q92791 437 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 RBM15Q96T37 977 aaKnown RBP eCLIP15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 LYPLA2O95372 231 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 CALB1P05937 261 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 WEE2P0C1S8 567 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 SUPT20HL2P0C7V6 817 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 GCNT1Q02742 428 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 ZNF677Q86XU0 584 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 PLEKHO2Q8TD55 490 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 HAUS2Q9NVX0 235 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 PCSK1NQ9UHG2 260 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 MYH11P35749 1972 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 RREB1Q92766 1687 aa15.87■□□□□ 0.13
UBE2D4-201ENST00000222402 CA4P22748 312 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 ACTN3Q08043 901 aaPredicted RBP15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 ZNF568Q3ZCX4 644 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 KLHL29Q96CT2 875 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 SENP7Q9BQF6 1050 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 MRPL4Q9BYD3 311 aaKnown RBP15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 PCYOX1Q9UHG3 505 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 MAPK13O15264 365 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 CYP1A2P05177 515 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 ADSSP30520 456 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 MTM1Q13496 603 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 DUOXA2Q1HG44 320 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 LRRC71Q8N4P6 559 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 KLC4Q9NSK0 619 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 CHRNB2P17787 502 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 BRD2P25440 801 aaKnown RBP15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 BASP1P80723 227 aaKnown RBP15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 BBS9Q3SYG4 887 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 TTC27Q6P3X3 843 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 CTAGE3PQ8IX95 158 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 FAM129AQ9BZQ8 928 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 A1CFQ9NQ94 594 aaKnown RBP15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 FGFR1OP2Q9NVK5 253 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 ZNF536O15090 1300 aa15.86■□□□□ 0.13
UBE2D4-201ENST00000222402 C19orf81C9J6K1 198 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 ZC3H11AO75152 810 aaKnown RBP eCLIP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 SPAG7O75391 227 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 PROSCO94903 275 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 NEDD9Q14511 834 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 PPP1R21Q6ZMI0 780 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 C1orf131Q8NDD1 294 aaKnown RBP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 HELQQ8TDG4 1101 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 KCTD2Q14681 263 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 SYDE1Q6ZW31 735 aaPredicted RBP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 ZBED8Q8IZ13 594 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 SAMD3Q8N6K7 520 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 FEZF2Q8TBJ5 459 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 CCHCR1Q8TD31 782 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 LRRC8CQ8TDW0 803 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 TGS1Q96RS0 853 aaKnown RBP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 ROPN1BQ9BZX4 212 aaPredicted RBP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 GPR88Q9GZN0 384 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 ROPN1Q9HAT0 212 aaPredicted RBP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 GGA3Q9NZ52 723 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 NOCTQ9UK39 431 aaKnown RBP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 WNK3Q9BYP7 1800 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 ZNF862O60290 1169 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 ZNF667Q5HYK9 610 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 CENPUQ71F23 418 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 PITPNM3Q9BZ71 974 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 PDGFDQ9GZP0 370 aaPredicted RBP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 PHBP35232 272 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 DRG2P55039 364 aaKnown RBP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 TFDP1Q14186 410 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 SULF1Q8IWU6 871 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 KCTD6Q8NC69 237 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 HSPH1Q92598 858 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 RPF1Q9H9Y2 349 aaKnown RBP15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 LTBP4Q8N2S1 1624 aa15.85■□□□□ 0.13
UBE2D4-201ENST00000222402 WDR91A4D1P6 747 aa15.84■□□□□ 0.13
UBE2D4-201ENST00000222402 H7C0C1 242 aa15.84■□□□□ 0.13
UBE2D4-201ENST00000222402 CDH16O75309 829 aa15.84■□□□□ 0.13
UBE2D4-201ENST00000222402 PRKCBP05771 671 aa15.84■□□□□ 0.13
UBE2D4-201ENST00000222402 ATP5OP48047 213 aa15.84■□□□□ 0.13
UBE2D4-201ENST00000222402 NFX1Q12986 1120 aaKnown RBP15.84■□□□□ 0.13
UBE2D4-201ENST00000222402 CYP4A22Q5TCH4 519 aa15.84■□□□□ 0.13
UBE2D4-201ENST00000222402 APOBEC3FQ8IUX4 373 aaKnown RBP15.84■□□□□ 0.13
UBE2D4-201ENST00000222402 LMO3Q8TAP4 145 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms