RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 HPCAL4Q9UM19 191 aa18.84■□□□□ 0.61
GCDH-201ENST00000222214 ANK1P16157 1881 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 MANSC4A6NHS7 340 aaPredicted RBP18.83■□□□□ 0.61
GCDH-201ENST00000222214 ATMINO43313 823 aaPredicted RBP18.83■□□□□ 0.61
GCDH-201ENST00000222214 SPOPO43791 374 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 MYL6P60660 151 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 GRIK4Q16099 956 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 AMHR2Q16671 573 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 SEL1L2Q5TEA6 688 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 EEF1DP3Q658K8 133 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 PHF13Q86YI8 300 aaPredicted RBP18.83■□□□□ 0.61
GCDH-201ENST00000222214 FAM71BQ8TC56 605 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 AP1M1Q9BXS5 423 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 ASB7Q9H672 318 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 MRPL47Q9HD33 250 aaKnown RBP18.83■□□□□ 0.61
GCDH-201ENST00000222214 PCDHA3Q9Y5H8 950 aa18.83■□□□□ 0.61
GCDH-201ENST00000222214 THAP12O43422 761 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 LSM8O95777 96 aaKnown RBP18.82■□□□□ 0.6
GCDH-201ENST00000222214 PEX5P50542 639 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 NOMO3P69849 1222 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 ZNF699Q32M78 642 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 NAA35Q5VZE5 725 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 MON1BQ7L1V2 547 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 NPLOC4Q8TAT6 608 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 WHAMMQ8TF30 809 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 ALG3Q92685 438 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 SCINQ9Y6U3 715 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 TMEM110-MUSTN1A8MSY1 372 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 IQCF3P0C7M6 154 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 HUNKP57058 714 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 C1QBPQ07021 282 aaKnown RBP18.82■□□□□ 0.6
GCDH-201ENST00000222214 MAP2K5Q13163 448 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 MORN1Q5T089 497 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 SND1Q7KZF4 910 aaKnown RBP eCLIP18.82■□□□□ 0.6
GCDH-201ENST00000222214 APBB1IPQ7Z5R6 666 aaPredicted RBP18.82■□□□□ 0.6
GCDH-201ENST00000222214 EFCAB13Q8IY85 973 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 GSPT2Q8IYD1 628 aaKnown RBP18.82■□□□□ 0.6
GCDH-201ENST00000222214 CYFIP2Q96F07 1278 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 ZNF518BQ9C0D4 1074 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.82■□□□□ 0.6
GCDH-201ENST00000222214 LCMT1Q9UIC8 334 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 ANAPC7Q9UJX3 599 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 UMODL1Q5DID0 1318 aa18.82■□□□□ 0.6
GCDH-201ENST00000222214 NLRP7Q8WX94 980 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 CPA5Q8WXQ8 436 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 CCDC102AQ96A19 550 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 ZBTB10Q96DT7 871 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 ZNF668Q96K58 619 aaPredicted RBP18.81■□□□□ 0.6
GCDH-201ENST00000222214 PDZD7Q9H5P4 517 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 TRPM7Q96QT4 1865 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 KAT6AQ92794 2004 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 BHMG1C9JSJ3 638 aaPredicted RBP18.81■□□□□ 0.6
GCDH-201ENST00000222214 GPR25O00155 361 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 MYO1FO00160 1098 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 ERLIN2O94905 339 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 STAG3L1P0CL83 205 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 CXCL8P10145 99 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 RWDD2BP57060 319 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 MRPS25P82663 173 aaKnown RBP18.81■□□□□ 0.6
GCDH-201ENST00000222214 PCBP1Q15365 356 aaKnown RBP eCLIP18.81■□□□□ 0.62e-6■■■■■ 36.4
GCDH-201ENST00000222214 TERF2Q15554 542 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 CST9Q5W186 159 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 NT5DC4Q86YG4 428 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 ZNF606Q8WXB4 792 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 RUNDC3BQ96NL0 473 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 ADPGKQ9BRR6 497 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 DDX47Q9H0S4 455 aaKnown RBP18.81■□□□□ 0.6
GCDH-201ENST00000222214 XYLT2Q9H1B5 865 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 FAM124BQ9H5Z6 455 aaPredicted RBP18.81■□□□□ 0.6
GCDH-201ENST00000222214 CISHQ9NSE2 258 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 ADAM22Q9P0K1 906 aa18.81■□□□□ 0.6
GCDH-201ENST00000222214 A6NJR5 290 aa18.8■□□□□ 0.6
GCDH-201ENST00000222214 VTNP04004 478 aa18.8■□□□□ 0.6
GCDH-201ENST00000222214 RRM1P23921 792 aa18.8■□□□□ 0.6
GCDH-201ENST00000222214 ATICP31939 592 aa18.8■□□□□ 0.6
GCDH-201ENST00000222214 CARSP49589 748 aaKnown RBP18.8■□□□□ 0.6
GCDH-201ENST00000222214 DHX34Q14147 1143 aaKnown RBP18.8■□□□□ 0.6
GCDH-201ENST00000222214 CEP120Q8N960 986 aa18.8■□□□□ 0.6
GCDH-201ENST00000222214 KRT35Q92764 455 aa18.8■□□□□ 0.6
GCDH-201ENST00000222214 SCLT1Q96NL6 688 aa18.8■□□□□ 0.6
GCDH-201ENST00000222214 RAB17Q9H0T7 212 aa18.8■□□□□ 0.6
GCDH-201ENST00000222214 ST7Q9NRC1 585 aa18.8■□□□□ 0.6
GCDH-201ENST00000222214 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.8■□□□□ 0.6
GCDH-201ENST00000222214 H3BQF6 201 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 ITGA4P13612 1032 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 ARF4P18085 180 aaPredicted RBP18.79■□□□□ 0.6
GCDH-201ENST00000222214 OSTNP61366 133 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 MARCH8Q5T0T0 291 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 ALS2CLQ60I27 953 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 CD302Q8IX05 232 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 MREGQ8N565 214 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 CASKIN2Q8WXE0 1202 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 IFT81Q8WYA0 676 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 VRTNQ9H8Y1 702 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 CPA4Q9UI42 421 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 MTUS1Q9ULD2 1270 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 NFU1Q9UMS0 254 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 UTP11Q9Y3A2 253 aaKnown RBP18.79■□□□□ 0.6
GCDH-201ENST00000222214 NRCAMQ92823 1304 aa18.79■□□□□ 0.6
GCDH-201ENST00000222214 FAM170AA1A519 330 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms