RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 RASSF9O75901 435 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 AKAP3O75969 853 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 TNNC2P02585 160 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 FGFR4P22455 802 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 ZNF132P52740 706 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 KCNJ2P63252 427 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 ALCAMQ13740 583 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 C4orf32Q8N8J7 132 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 ZBTB8BQ8NAP8 495 aaPredicted RBP11.18□□□□□ -0.62
VPS18-201ENST00000220509 MCPH1Q8NEM0 835 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 NDEL1Q9GZM8 345 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 HOXC10Q9NYD6 342 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 ZNF148Q9UQR1 794 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 CICQ96RK0 1608 aaPredicted RBP11.18□□□□□ -0.62
VPS18-201ENST00000220509 PPP1R11O60927 126 aaPredicted RBP11.18□□□□□ -0.62
VPS18-201ENST00000220509 ATP4AP20648 1035 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 SOX5P35711 763 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 GALCP54803 685 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 TGFB2P61812 414 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 RRP1BQ14684 758 aaKnown RBP11.18□□□□□ -0.62
VPS18-201ENST00000220509 ZNF507Q8TCN5 953 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 APOL6Q9BWW8 343 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 OSBPL1AQ9BXW6 950 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 VCX3BQ9H321 246 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 FGFR1OP2Q9NVK5 253 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 TMCC3Q9ULS5 477 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 AKT3Q9Y243 479 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 EML1O00423 815 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 TRAPPC3O43617 180 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 SMNDC1O75940 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
VPS18-201ENST00000220509 UBOX5O94941 541 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 MYCP01106 439 aaPredicted RBP11.18□□□□□ -0.62
VPS18-201ENST00000220509 SPDYE2Q495Y8 402 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 SCYL2Q6P3W7 929 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 TLDC1Q6P9B6 456 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.18□□□□□ -0.62
VPS18-201ENST00000220509 LPAR1Q92633 364 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 ARHGEF2Q92974 986 aaKnown RBP11.18□□□□□ -0.62
VPS18-201ENST00000220509 ACAD9Q9H845 621 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 NKIRAS1Q9NYS0 192 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 ANAPC7Q9UJX3 599 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 INTUQ9ULD6 942 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 TRIM33Q9UPN9 1127 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 IRS2Q9Y4H2 1338 aa11.18□□□□□ -0.62
VPS18-201ENST00000220509 CYP26A1O43174 497 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 BPIFB4P59827 614 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 COG2Q14746 738 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 PPP2R5EQ16537 467 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 SGO2Q562F6 1265 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 USP38Q8NB14 1042 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 TMEM143Q96AN5 459 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 HSPBP1Q9NZL4 362 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
VPS18-201ENST00000220509 A0A1W2PQJ5 194 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 SFNP31947 248 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 YARSP54577 528 aaKnown RBP11.17□□□□□ -0.62
VPS18-201ENST00000220509 BFSP1Q12934 665 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 MEA1Q16626 185 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 MUM1Q2TAK8 710 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 TRPM8Q7Z2W7 1104 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 POLR3FQ9H1D9 316 aaPredicted RBP11.17□□□□□ -0.62
VPS18-201ENST00000220509 PFDN4Q9NQP4 134 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 RAB20Q9NX57 234 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 ZFATQ9P243 1243 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 LNPEPQ9UIQ6 1025 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 TCP11X1B4DZS4 312 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 STX2P32856 288 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 HOXD12P35452 270 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 ACOT2P49753 483 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 DR1Q01658 176 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 EIF2B5Q13144 721 aaKnown RBP11.17□□□□□ -0.62
VPS18-201ENST00000220509 INAQ16352 499 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 P3H1Q32P28 736 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 KRT39Q6A163 491 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 ANKRD13BQ86YJ7 626 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 LMNTD2Q8IXW0 634 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 ZNF280CQ8ND82 737 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 HEMGNQ9BXL5 484 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 ZWILCHQ9H900 591 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 VPS37BQ9H9H4 285 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 ETNK1Q9HBU6 452 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 JPH1Q9HDC5 661 aaPredicted RBP11.17□□□□□ -0.62
VPS18-201ENST00000220509 TRPV5Q9NQA5 729 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 TSC22D4Q9Y3Q8 395 aa11.17□□□□□ -0.62
VPS18-201ENST00000220509 TMEM150BA6NC51 233 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 CLDN3O15551 220 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 SHBGP04278 402 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 KRT15P19012 456 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 ENDOUP21128 410 aaKnown RBP11.16□□□□□ -0.62
VPS18-201ENST00000220509 ZNF131P52739 623 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 IFI35P80217 286 aaPredicted RBP11.16□□□□□ -0.62
VPS18-201ENST00000220509 TMEM270Q6UE05 265 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 DPP9Q86TI2 863 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 RHOT2Q8IXI1 618 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 C11orf70Q9BRQ4 267 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 AGPAT3Q9NRZ7 376 aa11.16□□□□□ -0.62
VPS18-201ENST00000220509 DDX60Q8IY21 1712 aaKnown RBP11.16□□□□□ -0.62
VPS18-201ENST00000220509 GPC5P78333 572 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms