RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 DCTN4Q9UJW0 460 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 NEU2Q9Y3R4 380 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 VWA5AO00534 786 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 FNTAP49354 379 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 GPC3P51654 580 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 BACE1P56817 501 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 NLRP11P59045 1033 aaKnown RBP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 MRPS9P82933 396 aaKnown RBP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 MKRN3Q13064 507 aaKnown RBP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 CUL2Q13617 745 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 SMAD1Q15797 465 aaKnown RBP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 KCNT1Q5JUK3 1230 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 GPAT2Q6NUI2 795 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 TMEM161BQ8NDZ6 487 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 FAM149B1Q96BN6 582 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 DCPSQ96C86 337 aaKnown RBP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 KREMEN1Q96MU8 473 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 HESX1Q9UBX0 185 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 ASTN2O75129 1339 aaPredicted RBP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 CDH16O75309 829 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 CSDE1O75534 798 aaKnown RBP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 MT-ND3P03897 115 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 FDX1P10109 184 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 SLC8A1P32418 973 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 PCK1P35558 622 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 FKBP1AP62942 108 aaKnown RBP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 FMO1Q01740 532 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 CAV1Q03135 178 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 TRIM68Q6AZZ1 485 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 TRIM72Q6ZMU5 477 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 PRUNE1Q86TP1 453 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 DAW1Q8N136 415 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 KIF2BQ8N4N8 673 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 KLF6Q99612 283 aaPredicted RBP10.34□□□□□ -0.75
CSTF1-201ENST00000217109 DNAI2Q9GZS0 605 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 SLC38A10Q9HBR0 1119 aa10.34□□□□□ -0.75
CSTF1-201ENST00000217109 F5H423 210 aaPredicted RBP10.33□□□□□ -0.76
CSTF1-201ENST00000217109 KRT3P12035 628 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 ABCD1P33897 745 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 GTF2BQ00403 316 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 SLC9A9Q8IVB4 645 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 PARP9Q8IXQ6 854 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 SPIRE2Q8WWL2 714 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 NLRP7Q8WX94 980 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 GPRASP2Q96D09 838 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 RILPQ96NA2 401 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 MTMR12Q9C0I1 747 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CD248Q9HCU0 757 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 SLC40A1Q9NP59 571 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 RIPK2O43353 540 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 GRAP2O75791 330 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 PRKCBP05771 671 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 MAGEA4P43358 317 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 IRX4P78413 519 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 SPARCL1Q14515 664 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CLEC16AQ2KHT3 1053 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 EAPPQ56P03 285 aaPredicted RBP10.33□□□□□ -0.76
CSTF1-201ENST00000217109 ANO5Q75V66 913 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CCDC60Q8IWA6 550 aaPredicted RBP10.33□□□□□ -0.76
CSTF1-201ENST00000217109 FAM71AQ8IYT1 594 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 MCOLN2Q8IZK6 566 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CCHCR1Q8TD31 782 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CFAP36Q96G28 342 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 KIAA1683Q9H0B3 1180 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 GGA3Q9NZ52 723 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 PCDHA3Q9Y5H8 950 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 A0A0G2JND7 137 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 A0A1B0GUA9 196 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CCT8L1PA6NM43 557 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 TULP2O00295 520 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 PLSCR1O15162 318 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 DDX3YO15523 660 aaKnown RBP10.33□□□□□ -0.76
CSTF1-201ENST00000217109 MAFGO15525 162 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 MED7O43513 233 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 PRPSAP2O60256 369 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 SNRPFP62306 86 aaKnown RBP10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CNTN2Q02246 1040 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 NFX1Q12986 1120 aaKnown RBP10.33□□□□□ -0.76
CSTF1-201ENST00000217109 NEDD9Q14511 834 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 C6orf163Q5TEZ5 329 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 DUPD1Q68J44 220 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CD302Q8IX05 232 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 FEZF2Q8TBJ5 459 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 TMC2Q8TDI7 906 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CTNNAL1Q9UBT7 734 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 MAGED2Q9UNF1 606 aaPredicted RBP10.33□□□□□ -0.76
CSTF1-201ENST00000217109 TTLL3Q9Y4R7 772 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 RIPK3Q9Y572 518 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 MYH15Q9Y2K3 1946 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 M0QYV0 167 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 TRAPPC3O43617 180 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CCNE2O96020 404 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 OATP04181 439 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 NOVP48745 357 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 FAM102AQ5T9C2 384 aaPredicted RBP10.33□□□□□ -0.76
CSTF1-201ENST00000217109 CCDC62Q6P9F0 684 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 TRPM8Q7Z2W7 1104 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 MAP4K3Q8IVH8 894 aa10.33□□□□□ -0.76
CSTF1-201ENST00000217109 MAP7D3Q8IWC1 876 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms