RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Rnf139Q7TMV1 668 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Usp11Q99K46 921 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Hars2Q99KK9 505 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Paip2Q9D6V8 124 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Olig1Q9JKN5 260 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 H2-OaQ9QWV1 250 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Prdm12A2AJ77 365 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 EloblA6PWE0 161 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Gm5795E9PZN8 263 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 CopeO89079 308 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 RcvrnP34057 202 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Atp13a5Q3TYU2 1216 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 FaxcQ3UMF9 409 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 CbarpQ66L44 698 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Bri3bpQ8BXV2 253 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 PreplQ8C167 725 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Wrap53Q8VC51 532 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Pdcd7Q9WTY1 482 aa15.4■□□□□ 0.06
Msx3-201ENSMUST00000055353 Srsf11E9Q6E5 511 aaKnown RBP15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Gm7995L7N2E4 160 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Slc27a2O35488 620 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Tnfrsf18O35714 228 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 TxkP42682 527 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Gad2P48320 585 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Tgfbrap1Q3UR70 860 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Trim80Q3V061 624 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Dsg1aQ61495 1057 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Vat1lQ80TB8 417 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Sh2d5Q8JZW5 429 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 HibchQ8QZS1 385 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Rhobtb2Q91V93 728 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ttc1Q91Z38 292 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Cdk9Q99J95 372 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Golga1Q9CW79 758 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Rabgef1Q9JM13 491 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Psme4Q5SSW2 1843 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 AunipE9Q6Z5 340 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 CaluO35887 315 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Zfp953Q3UPV7 304 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Wdr18Q4VBE8 431 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Tom1l2Q5SRX1 507 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ksr1Q61097 873 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Psen2Q61144 448 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Tgoln2Q62314 363 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Cpa1Q7TPZ8 419 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Klhl29Q80T74 875 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Rbm12b1Q80YR9 836 aaKnown RBP15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Nipa1Q8BHK1 323 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Cwf19l1Q8CI33 537 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Pcdha2Q91Y17 948 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Rnf14Q9JI90 485 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Pdk2Q9JK42 407 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Nudt5Q9JKX6 218 aa15.39■□□□□ 0.05
Msx3-201ENSMUST00000055353 Apol8A2VDH7 339 aaKnown RBP15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Zfp839E9PUU5 921 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ctnnal1O88327 731 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Cops2P61202 443 aaKnown RBP15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Trim43bP86448 445 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Upf3bQ3ULL6 472 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Capn13Q3UW68 665 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Gm2163Q6PCY5 473 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Slc9c1Q6UJY2 1175 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Tph2Q8CGV2 488 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Usp33Q8R5K2 909 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Caskin2Q8VHK1 1201 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Cd248Q91V98 765 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Dnajc18Q9CZJ9 357 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Nop56Q9D6Z1 580 aaKnown RBP15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Rnf25Q9QZR0 456 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Cdca2Q14B71 982 aaKnown RBP15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Slc10a4Q3UEZ8 437 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Fam81aQ3UXZ6 364 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Srd5a1Q68FF9 255 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ero1aQ8R180 464 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Polr3fQ921X6 316 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ankef1Q9D2J7 775 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 1700016D06RikQ9DAA5 166 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Olr1Q9EQ09 363 aa15.38■□□□□ 0.05
Msx3-201ENSMUST00000055353 Sbf2E9PXF8 1872 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Gm11549A0A286YD83 63 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Rfx2P48379 717 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Wnt10bP48614 389 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Casp7P97864 303 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ppm1jQ149T7 507 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ankmy2Q3TPE9 440 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Tdpoz4Q6YCH2 370 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ankfy1Q810B6 1169 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Tmem145Q8C4U2 746 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Kdm1bQ8CIG3 826 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Zbtb44Q8R0A2 453 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Tmem174Q9DCX7 243 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Cntn6Q9JMB8 1028 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Clec4aQ9QZ15 238 aa15.37■□□□□ 0.05
Msx3-201ENSMUST00000055353 Eddm13E9Q7F5 164 aa15.36■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ptp4a2O70274 167 aa15.36■□□□□ 0.05
Msx3-201ENSMUST00000055353 Apba3O88888 571 aa15.36■□□□□ 0.05
Msx3-201ENSMUST00000055353 Fgfr2P21803 821 aa15.36■□□□□ 0.05
Msx3-201ENSMUST00000055353 Cxcr2P35343 359 aa15.36■□□□□ 0.05
Msx3-201ENSMUST00000055353 GckP52792 465 aa15.36■□□□□ 0.05
Msx3-201ENSMUST00000055353 Ripk2P58801 539 aa15.36■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms