RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Slc39a3Q99K24 317 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Usp29Q9ES63 869 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gipc1Q9Z0G0 333 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Krt16Q9Z2K1 469 aa11.25□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Lama4P97927 1816 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rfx8D3YU81 596 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Fgf15O35622 218 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pou6f1Q07916 301 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Micall2Q3TN34 1009 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Plekha7Q3UIL6 1118 aaKnown RBP11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rnf10Q3UIW5 804 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Lamc2Q61092 1191 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ptk6Q64434 451 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gpatch2lQ6PE65 482 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rnf168Q80XJ2 565 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Lrrc24Q8BHA1 521 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pcdhb7Q8CDY9 829 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 HmcesQ8R1M0 353 aaKnown RBP11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Agap3Q8VHH5 910 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ascc2Q91WR3 749 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rpa3Q9CQ71 121 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Hic1Q9R1Y5 733 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rgsl1H3BL40 1073 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Xbp1O35426 267 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Krt10P02535 570 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 SpoplQ2M2N2 392 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm8773Q3UQ24 132 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 ChfrQ810L3 664 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rusc1Q8BG26 893 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Wdr35Q8BND3 1181 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ccdc68Q8BVC4 333 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Galnt5Q8C102 930 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 McamQ8R2Y2 648 aaKnown RBP11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Paip2bQ91W45 136 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ubxn2aQ99KJ0 258 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Kif19Q99PT9 997 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Zcchc12Q9CZA5 402 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tll2Q9WVM6 1012 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm13084A2A8N0 494 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm45837F7D3W5 961 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Il1rl1P14719 567 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Wfs1P56695 890 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ces1eQ64176 562 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tmem179Q8BHH9 233 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Adgra1Q8C4G9 578 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Klhl11Q8CE33 709 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Slc44a4Q91VA1 707 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Itm2cQ91VK4 269 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Spns2Q91VM4 549 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pde2aQ922S4 916 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rilpl2Q99LE1 197 aa11.24□□□□□ -0.61
Rnf40-201ENSMUST00000033088 CitP49025 2055 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Frmd7A2AD83 703 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 DgkhD3YXJ0 1156 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Hmgb2P30681 210 aaKnown RBP11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tmed8Q3UHI4 326 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Olfml2bQ3V1G4 746 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Syce2Q505B8 171 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 DeptorQ570Y9 409 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Nme8Q715T0 586 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Tmc8Q7TN58 722 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 WhrnQ80VW5 918 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Zbtb41Q811F1 908 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Psmd5Q8BJY1 504 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Strip2Q8C9H6 844 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Sec14l2Q99J08 403 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Sgf29Q9DA08 293 aaKnown RBP11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 CtsfQ9R013 462 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Myh10Q61879 1976 aaKnown RBP11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Il15P48346 162 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Arl4cP61208 192 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Ddr1Q03146 911 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rtkn2Q14B46 604 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 B3gnt3Q5JCS9 372 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Atg14Q8CDJ3 492 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Kbtbd4Q8R179 534 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pgm3Q9CYR6 542 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 DgkeQ9R1C6 564 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Greb1lB9EJV3 1913 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm3424L7N298 263 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm8246M0QWX9 263 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 TdgP56581 421 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 NfixP70257 488 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Akr1c6P70694 323 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Mysm1Q69Z66 819 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Dnajc8Q6NZB0 253 aaKnown RBP11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gpr156Q6PCP7 798 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Olfr297Q7TS07 310 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Riox2Q8CD15 465 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Reep2Q8VCD6 254 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 HnmtQ91VF2 295 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Pih1d1Q9CQJ2 290 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Nr1h3Q9Z0Y9 445 aa11.23□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gm45233A0A0N4SVE0 221 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Npy5rO70342 466 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 AdssP46664 456 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Rab6bP61294 208 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Gdf10P97737 476 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Atp11aP98197 1187 aa11.22□□□□□ -0.61
Rnf40-201ENSMUST00000033088 Fgfr4Q03142 799 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms