RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Klra3Q64329 266 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Raver2Q7TPD6 673 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 CyldQ80TQ2 952 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 3830417A13RikQ8BQJ2 303 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Map1sQ8C052 973 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Gga1Q8R0H9 635 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Plcb4Q91UZ1 1175 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Me2Q99KE1 589 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Pgm1Q9D0F9 562 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Siglec1Q62230 1695 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tiam2Q6ZPF3 1715 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Vmn2r121A2BE32 847 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 UgcgO88693 394 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ccnd3P30282 292 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Lig1P37913 916 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ccng1P51945 294 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Gbp8Q2V6D6 525 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Gxylt1Q3UHH8 404 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Zbtb44Q8R0A2 453 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Gtf2ird1Q9JI57 1104 aaKnown RBP11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Pard6bQ9JK83 371 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Cul3Q9JLV5 768 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Myh7bA2AQP0 1941 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Klhdc7aA2APT9 773 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 4930544D05RikJ3QK56 214 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 DesP31001 469 aaKnown RBP11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Oprl1P35377 367 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Wdr41Q3UDP0 460 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fam92bQ3V2J0 292 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Syne3Q4FZC9 975 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 HnrnpdQ60668 355 aaKnown RBP11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ugt1a9Q62452 528 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 NostrinQ6WKZ7 506 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 CcnyQ8BGU5 341 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Mboat7Q8CHK3 473 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 IntS13Q8QZV7 732 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Olfr395Q8VGR3 312 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rev1Q920Q2 1249 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Sv2aQ9JIS5 742 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tmed2Q9R0Q3 201 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Zfp212G3X8R7 492 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Slc3a2P10852 526 aaKnown RBP11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Mov10P23249 1004 aaKnown RBP11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Wfs1P56695 890 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Psmc1P62192 440 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Gdpd4Q3TT99 632 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 PhkbQ7TSH2 1085 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rnf168Q80XJ2 565 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Nim1kQ8BHI9 436 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tmem260Q8BMD6 703 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Arhgap24Q8C4V1 747 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 AagabQ8R2R3 316 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Sec63Q8VHE0 760 aaKnown RBP11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tmx2Q9D710 295 aaKnown RBP11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ngly1Q9JI78 651 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Krt17Q9QWL7 433 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Phf2Q9WTU0 1096 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Kif9Q9WV04 790 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Aldh18a1Q9Z110 795 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Nr1i3O35627 358 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 4933409G03RikQ8C5U0 320 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Btbd6Q8K2J9 488 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fam49bQ921M7 324 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Polr3eQ9CZT4 710 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 March8Q9DBD2 286 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 AllcQ9JHX6 414 aa11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Edf1Q9JMG1 148 aaKnown RBP11.47□□□□□ -0.57
Msh3-201ENSMUST00000022220 Eif3dO70194 548 aaKnown RBP11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Alox15P39654 663 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ptprn2P80560 1001 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Pstpip1P97814 415 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Drp2Q05AA6 957 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rrp36Q3UFY0 244 aaKnown RBP11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 FaxcQ3UMF9 409 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Thrap3Q569Z6 951 aaKnown RBP11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ppp2r5cQ60996 524 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 WlsQ6DID7 541 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tmem117Q8BH18 514 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Wdr35Q8BND3 1181 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Vta1Q9CR26 309 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rfwd2Q9R1A8 733 aaKnown RBP11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tnni1Q9WUZ5 187 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rtl9Q32KG4 1339 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Lrrc73B2RWC4 316 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Heatr4E9Q357 955 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Casq2O09161 415 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 SftpbP50405 377 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Cnga4Q3UW12 575 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Scarf1Q5ND28 820 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Sin3bQ62141 1098 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Arhgef18Q6P9R4 1021 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Nsun6Q7TS68 476 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tcaf1Q8BNE1 924 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Heatr3Q8BQM4 679 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ttc16Q8C1F5 767 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Upb1Q8VC97 393 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 NcaldQ91X97 193 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 NelfcdQ922L6 591 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rnf112Q96DY5 654 aa11.46□□□□□ -0.57
Msh3-201ENSMUST00000022220 Zfp64Q99KE8 643 aa11.46□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms