RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Zscan4cQ80VJ6 506 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Tor4aQ8BH02 426 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Tmem117Q8BH18 514 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Pnma2Q8BHK0 365 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Shc2Q8BMC3 573 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Tsen34Q8BMZ5 316 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Metap1Q8BP48 386 aaKnown RBP11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Taf2Q8C176 1104 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Csnk1g3Q8C4X2 424 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Phldb2Q8K1N2 1249 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Stxbp5Q8K400 1152 aaKnown RBP11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Ap3m2Q8R2R9 418 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Mtif3Q9CZD5 276 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Lrrc71Q9D3W5 558 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Tmem86aQ9D8N3 241 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Spatc1lQ9D9W0 342 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Fzd2Q9JIP6 570 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Itga2bQ9QUM0 1033 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Ddx25Q9QY15 484 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Dnajc12Q9R022 198 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Nek3Q9R0A5 511 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 TfebQ9R210 475 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Magi2Q9WVQ1 1275 aa11.74□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Scgb2b18A0A087WPA9 112 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Gm4756A0A140LIS8 335 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 PtgisO35074 501 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 TnfP06804 235 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Fcgr2P08101 330 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Hoxb8P09632 243 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Calb1P12658 261 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 NrlP54846 237 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Kcnq1P97414 668 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 rp9P97762 213 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Cracr2aQ3UP38 310 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Bcar1Q61140 874 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Dlg4Q62108 724 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 RetsatQ64FW2 609 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Krt39Q6IFX4 482 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Rnf214Q8BFU3 668 aaKnown RBP11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 D130040H23RikQ8BII3 405 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 PolrmtQ8BKF1 1207 aaKnown RBP11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Gpr180Q8BPS4 441 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Slc9a9Q8BZ00 644 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Rasal3Q8C2K5 1041 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Pak2Q8CIN4 524 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Ugt2b1Q8R084 529 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Olfr532Q8VGT4 309 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Zmat2Q9CPW7 199 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Spg21Q9CQC8 308 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Chaf1aQ9QWF0 911 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Sorbs3Q9R1Z8 733 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Kmt2bO08550 2713 aa11.73□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Grik3B1AS29 919 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Pip4k2aO70172 405 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Wnt6P22727 364 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 PtmaP26350 111 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 TxkP42682 527 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 PkdccQ5RJI4 492 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Znf235Q61116 645 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 EregQ61521 162 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Mns1Q61884 491 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Jak2Q62120 1129 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Frmd5Q6P5H6 517 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Ankrd24Q80VM7 985 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Prss50Q8BLH5 439 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Zbtb49Q8BXX2 756 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Hgh1Q8C3I8 393 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Gpr158Q8C419 1200 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Lonp1Q8CGK3 949 aaKnown RBP11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Lrrc66Q8K0B3 872 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Olfr30Q8VGD8 315 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Mob2Q8VI63 235 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Setd3Q91WC0 594 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Sdcbp2Q99JZ0 292 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Smc1aQ9CU62 1233 aaKnown RBP11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Cxxc1Q9CWW7 660 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Slamf8Q9D3G2 278 aa11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 GatmQ9D964 423 aaKnown RBP11.72□□□□□ -0.53
Tubb1-201ENSMUST00000016399 1700001O22RikA2APZ1 375 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Gm8369E9PZI3 166 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 2010300C02RikE9Q3M9 1175 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Ugt1a6bK9J7B2 531 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Bcl7cO08664 217 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Kcnh2O35219 1162 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Psmc3O88685 442 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Vti1aO89116 217 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Slc3a2P10852 526 aaKnown RBP11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Ppp3caP63328 521 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Dcaf17Q3TUL7 519 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 SlmapQ3URD3 845 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 4933416C03RikQ3V063 378 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Olfr121Q5CZY0 321 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Cyp2c66Q5GLZ0 490 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 EfsQ64355 560 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Ugt1a6Q64435 531 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 PtprjQ64455 1238 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Ugt1a7cQ6ZQM8 531 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Rd3Q8BRE0 195 aa11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Pwp2Q8BU03 919 aaKnown RBP11.71□□□□□ -0.53
Tubb1-201ENSMUST00000016399 Inpp5fQ8CDA1 1132 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms