RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gm10250G3X9L6 160 aaKnown RBP13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Krt10P02535 570 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Sar1aP36536 198 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ntrk3Q6VNS1 825 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ano5Q75UR0 904 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ush1gQ80T11 461 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Dppa3Q8QZY3 150 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Pglyrp2Q8VCS0 530 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Olfr390Q8VEZ7 311 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Atp5hQ9DCX2 161 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Cdr2lA2A6T1 465 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 SarsP26638 512 aaKnown RBP13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 PorP37040 678 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Tac1P41539 130 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Dnajc6Q80TZ3 938 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Dusp4Q8BFV3 398 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ppp1r12bQ8BG95 976 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Pnma1Q8C1C8 353 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Bcas3Q8CCN5 928 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Stxbp5Q8K400 1152 aaKnown RBP13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Rilpl1Q9JJC6 406 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Extl3Q9WVL6 918 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 DgkhD3YXJ0 1156 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Usp35M0QWN7 1009 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Slc1a1P51906 523 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 CstaP56567 97 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 HnrnpdQ60668 355 aaKnown RBP13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Dnajc8Q6NZB0 253 aaKnown RBP13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Znf879Q8BI99 563 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Drd5Q8BLD9 478 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Pak4Q8BTW9 593 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Atg16l1Q8C0J2 607 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Rpn1Q91YQ5 608 aaKnown RBP13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Grk1Q9WVL4 564 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Prss51A0A286YDY8 319 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gm3095E9Q058 166 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 4930544D05RikJ3QK56 214 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 CenpaO35216 134 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Sstr1P30873 391 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Bpifb5Q3UQ05 490 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Impg2Q80XH2 1243 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Man2a2Q8BRK9 1152 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Nlrp4aQ8BU40 982 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Eif2b5Q8CHW4 717 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Caskin2Q8VHK1 1201 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Rassf7Q9DD19 359 aa13.43□□□□□ -0.26
Clcn3-201ENSMUST00000004430 C87977A2A958 498 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Tada2bD3Z4Z0 420 aaKnown RBP13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Pdk4O70571 412 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Rrm1P07742 792 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Pik3r1P26450 724 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Arl1P61211 181 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Rab6bP61294 208 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Myo1gQ5SUA5 1024 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Wdr60Q8C761 999 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Dennd1aQ8K382 1016 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Foxp3Q99JB6 429 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Casz1Q9CWL2 1761 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Lonrf1D3YY23 762 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Eif3eP60229 445 aaKnown RBP13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Pfkfb2P70265 519 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Psd3Q2PFD7 1037 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Tbc1d10cQ8C9V1 444 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ap2b1Q9DBG3 937 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Cpne8Q9DC53 577 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Rmdn1Q9DCV4 305 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Tlr5Q9JLF7 859 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Rnf25Q9QZR0 456 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Myh4Q5SX39 1939 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ripk2P58801 539 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Taf1bP97358 586 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Klra6Q60653 266 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Zswim5Q80TC6 1188 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Atg4cQ811C2 458 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Dcaf8Q8N7N5 591 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 MlklQ9D2Y4 472 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Myh6Q02566 1938 aaKnown RBP13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Fam205aA2APU8 1308 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Zscan4-ps3A0A1B0GRH6 506 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Zscan4-ps2A0A1C7CYU6 506 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Bpifb9bA2AJD1 591 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 MyocO70624 490 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ppp3caP63328 521 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gm1604bQ3TRG0 118 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 RimklbQ80WS1 387 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Bpifb9aQ80XI7 591 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Fbxo38Q8BMI0 1194 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ago2Q8CJG0 860 aaKnown RBP13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Tesk2Q8VCT9 570 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Sec14l2Q99J08 403 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Utp11Q9CZJ1 253 aaKnown RBP13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Terb2Q9D494 218 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Xpo7Q9EPK7 1087 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Slc26a4Q9R155 780 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Lama4P97927 1816 aa13.42□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Pnpla6Q3TRM4 1355 aa13.41□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Nhsl1Q8CAF4 1587 aa13.41□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gm3460E9QAI8 215 aa13.41□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gm43302L7N1X8 611 aa13.41□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Cdk14O35495 469 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms