RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Cdk9Q99J95 372 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Htra2Q9JIY5 458 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Stk11Q9WTK7 436 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Plcg1Q62077 1302 aa19.87■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Glt1d1A4FUP9 346 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ttc17E9PVB5 1198 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Snx3O70492 162 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Slc8a1P70414 970 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 4930502E18RikQ14BQ3 236 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 GmncQ3URY2 333 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Serpinb1cQ5SV42 375 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 AmphQ7TQF7 686 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 PhkbQ7TSH2 1085 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Sestd1Q80UK0 696 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 B3glctQ8BHT6 489 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Bri3bpQ8BXV2 253 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Dclre1bQ8C7W7 541 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ago2Q8CJG0 860 aaKnown RBP19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ces1fQ91WU0 561 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 DmgdhQ9DBT9 869 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Pdzd4Q9QY39 772 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 AunipE9Q6Z5 340 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 SfnO70456 248 aaKnown RBP19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Pde4aO89084 844 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Nr3c1P06537 783 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cav1P49817 178 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Sema5bQ60519 1093 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ubap1Q8BH48 502 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 McmbpQ8R3C0 642 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Uroc1Q8VC12 676 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Spns2Q91VM4 549 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cdk5rap3Q99LM2 503 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ino80bQ99PT3 375 aaKnown RBP19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Golga1Q9CW79 758 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tdrd12Q9CWU0 1215 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Zfp623Q9CY99 499 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Arih1Q9Z1K5 555 aa19.86■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Gm5795E9PZN8 263 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Sar1aP36536 198 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 TxkP42682 527 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Col6a1Q04857 1025 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ppp1r12cQ3UMT1 782 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Fam81aQ3UXZ6 364 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ccdc117Q6PB51 277 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Impg2Q80XH2 1243 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Orai2Q8BH10 250 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Dupd1Q8BK84 215 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 1700016D06RikQ9DAA5 166 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tlr9Q9EQU3 1032 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ctnnal1O88327 731 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Sash1P59808 1230 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cops2P61202 443 aaKnown RBP19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Srebf2Q3U1N2 1130 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 WlsQ6DID7 541 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Snx19Q6P4T1 997 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Shtn1Q8K2Q9 631 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Q8VDP2 222 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Nxf1Q99JX7 618 aaKnown RBP19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 TarsQ9D0R2 722 aaKnown RBP19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cst12Q9DAN8 128 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 IydQ9DCX8 285 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Slc22a3Q9WTW5 551 aa19.85■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 JrklB2RRL2 523 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ripk2P58801 539 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Actr2P61161 394 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Neurl1bQ0MW30 546 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Adamts18Q4VC17 1219 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tcf4Q60722 670 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cyfip1Q7TMB8 1253 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 LdhdQ7TNG8 484 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 ClasrpQ8CFC7 668 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tph2Q8CGV2 488 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Kdm1bQ8CIG3 826 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tspan8Q8R3G9 235 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Wrap53Q8VC51 532 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Lpgat1Q91YX5 370 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 SerhlQ9EPB5 311 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Cables1Q9ESJ1 568 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ddx24Q9ESV0 857 aaKnown RBP19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tmed2Q9R0Q3 201 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Trip11E9Q512 1976 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Gm9774A0A0A6YVU8 407 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Rgsl1H3BL40 1073 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Has3O08650 554 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Nub1P54729 614 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Eef1dP57776 281 aaKnown RBP19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ppm1jQ149T7 507 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Atp13a5Q3TYU2 1216 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Slc10a4Q3UEZ8 437 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Upf3bQ3ULL6 472 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Dhx32Q8BZS9 744 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Tmem145Q8C4U2 746 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Kbtbd13Q8C828 458 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Inpp5fQ8CDA1 1132 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Ero1aQ8R180 464 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Igf2bp3Q9CPN8 579 aaKnown RBP19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Emc2Q9CRD2 297 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Iqcf1Q9D9K8 182 aa19.84■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 SktA2AQ25 1946 aaKnown RBP19.83■□□□□ 0.77
Shkbp1-201ENSMUST00000003857 Slfn8B1ARD8 910 aa19.83■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms