RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Mta2Q9R190 668 aa17.43■□□□□ 0.38
Shh-201ENSMUST00000002708 Pgap3A2A559 320 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Zfp839E9PUU5 921 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 AfmO89020 608 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Slc8a1P70414 970 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Ttc39dQ0VF76 604 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Tcf4Q60722 670 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 MogsQ80UM7 834 aaKnown RBP17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Wrap53Q8VC51 532 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Tnpo2Q99LG2 887 aaKnown RBP17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Ecel1Q9JMI0 775 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Bcat1P24288 386 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Actr2P61161 394 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Stmn4P63042 189 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 VegfaQ00731 214 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Col6a1Q04857 1025 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Oog3Q3UWY1 500 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Zswim6Q80TB7 1207 aa17.42■□□□□ 0.38
Shh-201ENSMUST00000002708 Gm5926E9PWJ8 236 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Gm6588E9Q3K0 461 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Usp35M0QWN7 1009 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Ebf2O08792 575 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Slc27a2O35488 620 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Banf1O54962 89 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 SfnO70456 248 aaKnown RBP17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Atf2P16951 487 aaKnown RBP17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Ces1cP23953 554 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Ankmy2Q3TPE9 440 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Rmdn3Q3UJU9 470 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 HarsQ61035 509 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Birc2Q62210 612 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Prr18Q6PAN7 307 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Orai2Q8BH10 250 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Ldlrap1Q8C142 308 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Ppil2Q9D787 521 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Prdm15E9Q8T2 1174 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Akr1b7P21300 316 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 GmpsQ3THK7 693 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Gprin1Q3UNH4 932 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Tlr3Q99MB1 905 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Ankef1Q9D2J7 775 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Mrpl2Q9D773 306 aaKnown RBP17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Iqcf1Q9D9K8 182 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 SerhlQ9EPB5 311 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Ddx24Q9ESV0 857 aaKnown RBP17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Mzf1S4R1L6 814 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Zgrf1Q0VGT4 1863 aa17.41■□□□□ 0.38
Shh-201ENSMUST00000002708 Gpr161B2RPY5 545 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Casp7P97864 303 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Slc10a4Q3UEZ8 437 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Grid1Q61627 1009 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Dus1lQ8C2P3 475 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Taf1dQ9D4V4 322 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 1700016D06RikQ9DAA5 166 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Fundc1Q9DB70 155 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Tmod2Q9JKK7 351 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Nudt5Q9JKX6 218 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Ccdc138Q0VF22 680 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Kmt5aQ2YDW7 349 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Rnf10Q3UIW5 804 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Garem2Q6PAJ3 880 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Rnf139Q7TMV1 668 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Rbm12b1Q80YR9 836 aaKnown RBP17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 PimregQ8BFY7 231 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Rab44Q8CB87 725 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Angel1Q8VCU0 667 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Acot11Q8VHQ9 594 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Gtf3c6Q9D8P7 227 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 DmgdhQ9DBT9 869 aa17.4■□□□□ 0.38
Shh-201ENSMUST00000002708 Fam193bQ3U2K0 892 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 Sema5bQ60519 1093 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 Man2a2Q8BRK9 1152 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 Slc4a7Q8BTY2 1034 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 Uba6Q8C7R4 1053 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 Olfr1499Q8VG65 314 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 BrdtQ91Y44 956 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 Nt5c1bQ91YE9 573 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 Bag2Q91YN9 210 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 NptxrQ99J85 493 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 Bco2Q99NF1 532 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 AuhQ9JLZ3 314 aa17.39■□□□□ 0.38
Shh-201ENSMUST00000002708 Spata31d1dE9Q5W2 1247 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 GckP52792 465 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Igsf9Q05BQ1 1179 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 FaxcQ3UMF9 409 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Fam92bQ3V2J0 292 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Wdr18Q4VBE8 431 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Orc2Q60862 576 aaKnown RBP17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Srd5a1Q68FF9 255 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Ddhd1Q80YA3 547 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Cd300ldQ8VCH2 221 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Q9D2Q3 444 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Nsmce1Q9D720 266 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Nphs1Q9QZS7 1256 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 NinQ61043 2035 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Gm13084A2A8N0 494 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Arhgef10lA2AWP8 1280 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Apba3O88888 571 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Prkg1P0C605 671 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 TxkP42682 527 aa17.39■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms