RNA–Protein interactions for RNA: YPR172W

YPR172W, Transcript of Putative pyridoxal 5'-phosphate synthase, yeast

Gene YPR172W, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR172W	YPR172W	MSN4	P33749	630 aa		1.27	□□□□□ -2.21
YPR172W	YPR172W	PRM10	P42946	383 aa		1.27	□□□□□ -2.21
YPR172W	YPR172W	LIA1	P47120	325 aa	Known RBP	1.27	□□□□□ -2.21
YPR172W	YPR172W	NSA1	P53136	463 aa	Predicted RBP	1.27	□□□□□ -2.21
YPR172W	YPR172W	YMD8	Q03697	442 aa		1.27	□□□□□ -2.21
YPR172W	YPR172W	FKS1	P38631	1876 aa	Known RBP	1.26	□□□□□ -2.21
YPR172W	YPR172W	CDC8	P00572	216 aa		1.26	□□□□□ -2.21
YPR172W	YPR172W	BCY1	P07278	416 aa	Known RBP	1.26	□□□□□ -2.21
YPR172W	YPR172W	YHR180W	P38868	163 aa		1.26	□□□□□ -2.21
YPR172W	YPR172W	COX15	P40086	486 aa		1.26	□□□□□ -2.21
YPR172W	YPR172W	PRE6	P40303	254 aa	Known RBP	1.26	□□□□□ -2.21
YPR172W	YPR172W	YJR149W	P47177	404 aa		1.26	□□□□□ -2.21
YPR172W	YPR172W	TRM9	P49957	279 aa		1.26	□□□□□ -2.21
YPR172W	YPR172W	DID2	P69771	204 aa		1.26	□□□□□ -2.21
YPR172W	YPR172W	LSO2	Q3E772	92 aa	Known RBP	1.26	□□□□□ -2.21
YPR172W	YPR172W	YPL229W	Q99395	206 aa		1.26	□□□□□ -2.21
YPR172W	YPR172W	SPT3	P06844	337 aa		1.25	□□□□□ -2.21
YPR172W	YPR172W	YOL162W	P0CF19	215 aa		1.25	□□□□□ -2.21
YPR172W	YPR172W	DDI2	P0CH63	225 aa		1.25	□□□□□ -2.21
YPR172W	YPR172W	DDI3	P0CH64	225 aa		1.25	□□□□□ -2.21
YPR172W	YPR172W	CDC10	P25342	322 aa	Known RBP	1.25	□□□□□ -2.21
YPR172W	YPR172W	NTF2	P33331	125 aa	Known RBP	1.25	□□□□□ -2.21
YPR172W	YPR172W	VPS21	P36017	210 aa	Known RBP	1.25	□□□□□ -2.21
YPR172W	YPR172W	SVP26	P38869	228 aa		1.25	□□□□□ -2.21
YPR172W	YPR172W	PEX17	P40155	199 aa		1.25	□□□□□ -2.21
YPR172W	YPR172W	ERV29	P53337	310 aa		1.25	□□□□□ -2.21
YPR172W	YPR172W	BUD25	P85052	153 aa		1.25	□□□□□ -2.21
YPR172W	YPR172W	DCN1	Q12395	269 aa		1.25	□□□□□ -2.21
YPR172W	YPR172W	CFT1	Q06632	1357 aa	Known RBP	1.24	□□□□□ -2.21
YPR172W	YPR172W	YPR170W-B	P0C5R9	85 aa		1.24	□□□□□ -2.21
YPR172W	YPR172W	PET9	P18239	318 aa	Known RBP	1.24	□□□□□ -2.21
YPR172W	YPR172W	SSO1	P32867	290 aa		1.24	□□□□□ -2.21
YPR172W	YPR172W	DOG2	P38773	246 aa		1.24	□□□□□ -2.21
YPR172W	YPR172W	AGE2	P40529	298 aa		1.24	□□□□□ -2.21
YPR172W	YPR172W	RPL33B	P41056	107 aa	Known RBP	1.24	□□□□□ -2.21
YPR172W	YPR172W	RPC17	P47076	161 aa		1.24	□□□□□ -2.21
YPR172W	YPR172W	TOS8	P53147	276 aa		1.24	□□□□□ -2.21
YPR172W	YPR172W	DRS2	P39524	1355 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	MATALPHA1	P0CY06	175 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	HMLALPHA1	P0CY07	175 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	RPL24B	P24000	155 aa	Known RBP	1.23	□□□□□ -2.21
YPR172W	YPR172W	MEI4	P29467	408 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	AVT2	P39981	480 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	YER085C	P40058	173 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	ICE2	P40499	491 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	YNR062C	P53748	327 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	FYV6	P53913	173 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	YNL010W	P53981	241 aa	Known RBP	1.23	□□□□□ -2.21
YPR172W	YPR172W	MZM1	Q03429	123 aa	Predicted RBP	1.23	□□□□□ -2.21
YPR172W	YPR172W	PSF1	Q12488	208 aa		1.23	□□□□□ -2.21
YPR172W	YPR172W	YHR139C-A	O13536	103 aa		1.22	□□□□□ -2.21
YPR172W	YPR172W	URA6	P15700	204 aa		1.22	□□□□□ -2.21
YPR172W	YPR172W	ATG22	P25568	528 aa		1.22	□□□□□ -2.21
YPR172W	YPR172W	VMA6	P32366	345 aa	Known RBP	1.22	□□□□□ -2.21
YPR172W	YPR172W	IRC22	P40006	225 aa		1.22	□□□□□ -2.21
YPR172W	YPR172W	PGD1	P40356	397 aa		1.22	□□□□□ -2.21
YPR172W	YPR172W	TIR3	P40552	269 aa		1.22	□□□□□ -2.21
YPR172W	YPR172W	MIC26	P50087	233 aa		1.22	□□□□□ -2.21
YPR172W	YPR172W	AIF1	P52923	378 aa		1.22	□□□□□ -2.21
YPR172W	YPR172W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1.22	□□□□□ -2.21	not detected
YPR172W	YPR172W	SML1	Q04964	104 aa		1.22	□□□□□ -2.21
YPR172W	YPR172W	MRPS28	P21771	286 aa		1.21	□□□□□ -2.22
YPR172W	YPR172W	YKR045C	P36138	183 aa		1.21	□□□□□ -2.22
YPR172W	YPR172W	BRR6	P53062	197 aa		1.21	□□□□□ -2.22
YPR172W	YPR172W	PRM8	P53174	237 aa		1.21	□□□□□ -2.22
YPR172W	YPR172W	SNZ1	Q03148	297 aa		1.21	□□□□□ -2.22
YPR172W	YPR172W	TRM12	Q04235	462 aa		1.21	□□□□□ -2.22
YPR172W	YPR172W	LPP1	Q04396	274 aa		1.21	□□□□□ -2.22
YPR172W	YPR172W	CDC123	Q05791	360 aa		1.21	□□□□□ -2.22
YPR172W	YPR172W	REP2	P03872	296 aa		1.2	□□□□□ -2.22
YPR172W	YPR172W	RHO1	P06780	209 aa	Known RBP	1.2	□□□□□ -2.22
YPR172W	YPR172W	PPA2	P28239	310 aa		1.2	□□□□□ -2.22
YPR172W	YPR172W	YBR219C	P38317	127 aa		1.2	□□□□□ -2.22
YPR172W	YPR172W	POP4	P38336	279 aa		1.2	□□□□□ -2.22
YPR172W	YPR172W	THP2	O13539	261 aa	Known RBP	1.19	□□□□□ -2.22
YPR172W	YPR172W	CDC28	P00546	298 aa	Known RBP	1.19	□□□□□ -2.22
YPR172W	YPR172W	YLR156W	P0CE96	114 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	YLR159W	P0CE97	114 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	YLR161W	P0CE98	114 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	YMR31	P19955	123 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	YGL010W	P25338	174 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	BMH2	P34730	273 aa	Known RBP	1.19	□□□□□ -2.22
YPR172W	YPR172W	SKG1	P36169	355 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	MRPL28	P36527	147 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	MIC12	P38341	106 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	URA8	P38627	578 aa	Predicted RBP	1.19	□□□□□ -2.22
YPR172W	YPR172W	YNL217W	P40152	326 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	FAR7	P43592	221 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	YDR248C	Q03786	193 aa		1.19	□□□□□ -2.22
YPR172W	YPR172W	SPG3	Q04398	127 aa	Predicted RBP	1.19	□□□□□ -2.22
YPR172W	YPR172W	RPL28	P02406	149 aa	Known RBP	1.18	□□□□□ -2.22
YPR172W	YPR172W	RPL27B	P0C2H7	136 aa	Known RBP	1.18	□□□□□ -2.22
YPR172W	YPR172W	FZF1	P32805	299 aa		1.18	□□□□□ -2.22
YPR172W	YPR172W	YET1	P35723	206 aa		1.18	□□□□□ -2.22
YPR172W	YPR172W	SRY1	P36007	326 aa		1.18	□□□□□ -2.22
YPR172W	YPR172W	YBR220C	P38318	560 aa		1.18	□□□□□ -2.22
YPR172W	YPR172W	TCD1	P38756	429 aa		1.18	□□□□□ -2.22
YPR172W	YPR172W	RTR1	P40084	226 aa	Predicted RBP	1.18	□□□□□ -2.22
YPR172W	YPR172W	YRB1	P41920	201 aa	Known RBP	1.18	□□□□□ -2.22
YPR172W	YPR172W	BXI1	P48558	297 aa		1.18	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms