RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C TAT1P38085 619 aa2.97□□□□□ -1.93
RPA135YPR010C RTC3P38804 111 aaPredicted RBP2.97□□□□□ -1.93
RPA135YPR010C YER079WP40052 210 aaKnown RBP2.97□□□□□ -1.93
RPA135YPR010C GNA1P43577 159 aaPredicted RBP2.97□□□□□ -1.93
RPA135YPR010C AVT4P50944 713 aa2.97□□□□□ -1.93
RPA135YPR010C UFD1P53044 361 aa2.97□□□□□ -1.93
RPA135YPR010C PEF1P53238 335 aa2.97□□□□□ -1.93
RPA135YPR010C NAM8Q00539 523 aaKnown RBP2.97□□□□□ -1.93
RPA135YPR010C GMC1Q04399 608 aa2.97□□□□□ -1.93
RPA135YPR010C YDR114CQ04597 100 aa2.97□□□□□ -1.93
RPA135YPR010C KEI1Q06346 221 aa2.97□□□□□ -1.93
RPA135YPR010C COQ10Q08058 207 aa2.97□□□□□ -1.93
RPA135YPR010C RIB5P38145 238 aa2.97□□□□□ -1.93
RPA135YPR010C WSC4P38739 605 aa2.97□□□□□ -1.93
RPA135YPR010C ALP1P38971 573 aa2.97□□□□□ -1.93
RPA135YPR010C RPE1P46969 238 aa2.97□□□□□ -1.93
RPA135YPR010C SNN1P48232 102 aa2.97□□□□□ -1.93
RPA135YPR010C SLX9P53251 210 aaPredicted RBP2.97□□□□□ -1.93
RPA135YPR010C GTF1P53260 183 aaPredicted RBP2.97□□□□□ -1.93
RPA135YPR010C MTM1P53320 366 aa2.97□□□□□ -1.93
RPA135YPR010C Q0144Q9ZZW2 109 aa2.97□□□□□ -1.93
RPA135YPR010C MES1P00958 751 aaKnown RBP2.97□□□□□ -1.93
RPA135YPR010C ELO2P25358 347 aa2.97□□□□□ -1.93
RPA135YPR010C PTH1P38876 190 aaKnown RBP2.97□□□□□ -1.93
RPA135YPR010C YER184CP39961 794 aa2.97□□□□□ -1.93
RPA135YPR010C UBC13P52490 153 aa2.97□□□□□ -1.93
RPA135YPR010C MPP6P53725 186 aaPredicted RBP2.97□□□□□ -1.93
RPA135YPR010C VPS28Q02767 242 aa2.97□□□□□ -1.93
RPA135YPR010C YDC1Q02896 317 aa2.97□□□□□ -1.93
RPA135YPR010C FCY22Q12119 530 aa2.97□□□□□ -1.93
RPA135YPR010C NCE102Q12207 173 aaRIP-Chip data2.97□□□□□ -1.93not detected
RPA135YPR010C TRM13Q12383 476 aa2.97□□□□□ -1.93
RPA135YPR010C FSH3Q99369 266 aa2.97□□□□□ -1.93
RPA135YPR010C TPI1P00942 248 aaKnown RBP2.96□□□□□ -1.94
RPA135YPR010C PET494P07390 489 aaPredicted RBP2.96□□□□□ -1.94
RPA135YPR010C RPP1P38786 293 aa2.96□□□□□ -1.94
RPA135YPR010C LSM12P38828 187 aaKnown RBP2.96□□□□□ -1.94
RPA135YPR010C YND1P40009 630 aa2.96□□□□□ -1.94
RPA135YPR010C PMT6P42934 759 aa2.96□□□□□ -1.94
RPA135YPR010C YAR1P46683 200 aa2.96□□□□□ -1.94
RPA135YPR010C XPT1P47165 209 aa2.96□□□□□ -1.94
RPA135YPR010C YGL260WP53056 76 aa2.96□□□□□ -1.94
RPA135YPR010C TIM44Q01852 431 aa2.96□□□□□ -1.94
RPA135YPR010C YPR147CQ06522 304 aaKnown RBP2.96□□□□□ -1.94
RPA135YPR010C RRI1Q12468 440 aa2.96□□□□□ -1.94
RPA135YPR010C YBR085C-AO43137 85 aa2.96□□□□□ -1.94
RPA135YPR010C MATALPHA1P0CY06 175 aa2.96□□□□□ -1.94
RPA135YPR010C HMLALPHA1P0CY07 175 aa2.96□□□□□ -1.94
RPA135YPR010C CLG1P35190 452 aa2.96□□□□□ -1.94
RPA135YPR010C MCH2P36032 473 aa2.96□□□□□ -1.94
RPA135YPR010C RTS2P40962 232 aa2.96□□□□□ -1.94
RPA135YPR010C ORM1P53224 222 aa2.96□□□□□ -1.94
RPA135YPR010C DIA1P54005 336 aa2.96□□□□□ -1.94
RPA135YPR010C RSM23Q01163 450 aa2.96□□□□□ -1.94
RPA135YPR010C PFA5Q03289 374 aa2.96□□□□□ -1.94
RPA135YPR010C SEC13Q04491 297 aaKnown RBP2.96□□□□□ -1.94
RPA135YPR010C TRI1Q05024 226 aa2.96□□□□□ -1.94
RPA135YPR010C SNA4Q07549 140 aa2.96□□□□□ -1.94
RPA135YPR010C STE4P18851 423 aa2.95□□□□□ -1.94
RPA135YPR010C UTR1P21373 530 aa2.95□□□□□ -1.94
RPA135YPR010C CAM1P29547 415 aaKnown RBP2.95□□□□□ -1.94
RPA135YPR010C RFC2P40348 353 aa2.95□□□□□ -1.94
RPA135YPR010C AVT7P40501 490 aa2.95□□□□□ -1.94
RPA135YPR010C SYS1P41544 203 aa2.95□□□□□ -1.94
RPA135YPR010C YDR415CQ04033 374 aaPredicted RBP2.95□□□□□ -1.94
RPA135YPR010C COQ11Q05892 277 aa2.95□□□□□ -1.94
RPA135YPR010C MCH4Q08268 501 aa2.95□□□□□ -1.94
RPA135YPR010C PET20Q99373 253 aa2.95□□□□□ -1.94
RPA135YPR010C NAM2P11325 894 aa2.95□□□□□ -1.94
RPA135YPR010C RPL30P14120 105 aaKnown RBP2.95□□□□□ -1.94
RPA135YPR010C PPZ2P33329 710 aa2.95□□□□□ -1.94
RPA135YPR010C MRPL4P36517 319 aa2.95□□□□□ -1.94
RPA135YPR010C YER121WP40076 114 aa2.95□□□□□ -1.94
RPA135YPR010C AIR1P40507 360 aaKnown RBP2.95□□□□□ -1.94
RPA135YPR010C PHB2P50085 310 aa2.95□□□□□ -1.94
RPA135YPR010C YGL117WP53133 265 aa2.95□□□□□ -1.94
RPA135YPR010C HUT1Q12520 339 aa2.95□□□□□ -1.94
RPA135YPR010C YMR144WP40214 342 aaKnown RBP2.95□□□□□ -1.94
RPA135YPR010C SWM2P40342 146 aa2.95□□□□□ -1.94
RPA135YPR010C POP1P41812 875 aa2.95□□□□□ -1.94
RPA135YPR010C CCC1P47818 322 aa2.95□□□□□ -1.94
RPA135YPR010C ARO8P53090 500 aaKnown RBP2.95□□□□□ -1.94
RPA135YPR010C YNR048WP53740 393 aa2.95□□□□□ -1.94
RPA135YPR010C MRPL35Q06678 367 aa2.95□□□□□ -1.94
RPA135YPR010C YOR186WQ08560 144 aa2.95□□□□□ -1.94
RPA135YPR010C YOR015WQ12169 119 aa2.95□□□□□ -1.94
RPA135YPR010C YLR108CQ12259 485 aa2.95□□□□□ -1.94
RPA135YPR010C SPS4P09937 338 aa2.94□□□□□ -1.94
RPA135YPR010C URA5P13298 226 aaKnown RBP2.94□□□□□ -1.94
RPA135YPR010C REC114P32841 428 aa2.94□□□□□ -1.94
RPA135YPR010C UME6P39001 836 aa2.94□□□□□ -1.94
RPA135YPR010C PAC2P39937 518 aa2.94□□□□□ -1.94
RPA135YPR010C PIG2P40187 538 aa2.94□□□□□ -1.94
RPA135YPR010C AGE2P40529 298 aa2.94□□□□□ -1.94
RPA135YPR010C HRI1Q05905 244 aaKnown RBP2.94□□□□□ -1.94
RPA135YPR010C MRPL51Q06090 140 aaPredicted RBP2.94□□□□□ -1.94
RPA135YPR010C NOC4Q06512 552 aaPredicted RBP2.94□□□□□ -1.94
RPA135YPR010C TDH3P00359 332 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
RPA135YPR010C COX2P00410 251 aa2.94□□□□□ -1.94
RPA135YPR010C GLC7P32598 312 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms