RNA–Protein interactions for RNA: YOR115C

TRS33, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS33, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS33	YOR115C	APD1	P38281	316 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	UMP1	P38293	148 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	YHR210C	P38893	341 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
TRS33	YOR115C	UIP3	P39547	235 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	GLR1	P41921	483 aa	Known RBP	4.27	□□□□□ -1.73
TRS33	YOR115C	ERJ5	P43613	295 aa	Predicted RBP	4.27	□□□□□ -1.73
TRS33	YOR115C	PHB2	P50085	310 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	YGR126W	P53274	230 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	SAM50	P53969	484 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	YML018C	Q03730	393 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	YDR102C	Q03864	110 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	NNT1	Q05874	261 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	YPR147C	Q06522	304 aa	Known RBP	4.27	□□□□□ -1.73
TRS33	YOR115C	SYM1	Q06563	197 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	IRC19	Q07843	230 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	FRE7	Q12333	620 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	TFC7	Q12415	435 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	PRM4	Q12498	284 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	YIL046W-A	Q3E7Z4	54 aa		4.27	□□□□□ -1.73
TRS33	YOR115C	REP2	P03872	296 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	GLK1	P17709	500 aa	Known RBP	4.26	□□□□□ -1.73
TRS33	YOR115C	CPR4	P25334	318 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	CPR3	P25719	182 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	VAM7	P32912	316 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	FLO10	P36170	1169 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	FRM2	P37261	193 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	FIG1	P38224	298 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	LAG1	P38703	411 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	LSM12	P38828	187 aa	Known RBP	4.26	□□□□□ -1.73
TRS33	YOR115C	GCV3	P39726	170 aa	Predicted RBP	4.26	□□□□□ -1.73
TRS33	YOR115C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
TRS33	YOR115C	YIR035C	P40579	254 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	SNN1	P48232	102 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	NIF3	P53081	288 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	GIM3	P53900	129 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	RNH201	P53942	307 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	APM1	Q00776	475 aa	Predicted RBP	4.26	□□□□□ -1.73
TRS33	YOR115C	ODC1	Q03028	310 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	YDR248C	Q03786	193 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	CTS2	Q06350	511 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	RRT7	Q07829	113 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	PET20	Q99373	253 aa		4.26	□□□□□ -1.73
TRS33	YOR115C	YMR084W	A2P2R3	262 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	YAL064W-B	O13512	126 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	AIM17	P23180	465 aa	Known RBP	4.25	□□□□□ -1.73
TRS33	YOR115C	UTH1	P36135	365 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	COS8	P38723	381 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	ASP1	P38986	381 aa	Predicted RBP	4.25	□□□□□ -1.73
TRS33	YOR115C	ATF1	P40353	525 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	MCM22	P47167	239 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	AAH1	P53909	347 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	NRK1	P53915	240 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	EST3	Q03096	181 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	HNT1	Q04344	158 aa	Known RBP	4.25	□□□□□ -1.73
TRS33	YOR115C	NOC4	Q06512	552 aa	Predicted RBP	4.25	□□□□□ -1.73
TRS33	YOR115C	BER1	Q06688	274 aa	Known RBP	4.25	□□□□□ -1.73
TRS33	YOR115C	RDL2	Q08742	149 aa	Known RBP	4.25	□□□□□ -1.73
TRS33	YOR115C	VMA9	Q3E7B6	73 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	FMP27	Q06179	2628 aa		4.25	□□□□□ -1.73
TRS33	YOR115C	MSW1	P04803	379 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	MAK32	P23060	363 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	ECM31	P38122	312 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	IDP2	P41939	412 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	LCL3	P53153	274 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	PNC1	P53184	216 aa	Known RBP	4.24	□□□□□ -1.73
TRS33	YOR115C	CAF40	P53829	373 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	MCH4	Q08268	501 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	SRL2	Q12020	392 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	ATP16	Q12165	160 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	MCT1	Q12283	360 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	RRI1	Q12468	440 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	YHR214C-E	Q8TGK0	99 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	ISN1	Q99312	450 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	HFA1	P32874	2273 aa		4.24	□□□□□ -1.73
TRS33	YOR115C	MES1	P00958	751 aa	Known RBP	4.23	□□□□□ -1.73
TRS33	YOR115C	SSA3	P09435	649 aa	Known RBP	4.23	□□□□□ -1.73
TRS33	YOR115C	YLL053C	P0CD98	152 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	MRP2	P10663	115 aa	Predicted RBP	4.23	□□□□□ -1.73
TRS33	YOR115C	ARO3	P14843	370 aa	Known RBP	4.23	□□□□□ -1.73
TRS33	YOR115C	MRS4	P23500	304 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	VMA16	P23968	213 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	EHD3	P28817	500 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	PMT2	P31382	759 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	SRB6	P32570	121 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	YPC1	P38298	316 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	SHO1	P40073	367 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	ALG9	P53868	555 aa	Known RBP	4.23	□□□□□ -1.73
TRS33	YOR115C	SKO1	Q02100	647 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	CAB5	Q03941	241 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	RTT103	Q05543	409 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	SCP1	Q08873	200 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	REX3	Q12090	404 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
TRS33	YOR115C	YLR146W-A	Q2V2P1	62 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	PCC1	Q3E833	88 aa		4.23	□□□□□ -1.73
TRS33	YOR115C	BLM10	P43583	2143 aa		4.22	□□□□□ -1.73
TRS33	YOR115C	COX5B	P00425	151 aa		4.22	□□□□□ -1.73
TRS33	YOR115C	UBI4	P0CG63	381 aa	Known RBP	4.22	□□□□□ -1.73
TRS33	YOR115C	RPL40A	P0CH08	128 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms