RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	RPL6B	P05739	176 aa	Known RBP	3.02	□□□□□ -1.93
TPM1	YNL079C	HIS3	P06633	220 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	RPS18A	P0CX55	146 aa	Known RBP	3.02	□□□□□ -1.93
TPM1	YNL079C	RPS18B	P0CX56	146 aa	Predicted RBP	3.02	□□□□□ -1.93
TPM1	YNL079C	PET54	P10834	293 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	STF2	P16965	84 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	ATG22	P25568	528 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	POP5	P28005	173 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	FAA1	P30624	700 aa	Known RBP	3.02	□□□□□ -1.93
TPM1	YNL079C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
TPM1	YNL079C	PAU2	P32612	120 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	PPQ1	P32945	549 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	MSN4	P33749	630 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	UTP30	P36144	274 aa	Known RBP	3.02	□□□□□ -1.93
TPM1	YNL079C	ATP3	P38077	311 aa	Known RBP	3.02	□□□□□ -1.93
TPM1	YNL079C	YBR242W	P38331	238 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	MLH1	P38920	769 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	FET3	P38993	636 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	BNA6	P43619	295 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	SEH1	P53011	349 aa	Known RBP	3.02	□□□□□ -1.93
TPM1	YNL079C	MPP6	P53725	186 aa	Predicted RBP	3.02	□□□□□ -1.93
TPM1	YNL079C	MRPS16	Q02608	121 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	COQ10	Q08058	207 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	HRT1	Q08273	121 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	ATG41	Q12048	136 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	MCP1	Q12106	302 aa		3.02	□□□□□ -1.93
TPM1	YNL079C	SPS2	P08459	502 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	ARF1	P11076	181 aa	Known RBP	3.01	□□□□□ -1.93
TPM1	YNL079C	GRX2	P17695	143 aa	Known RBP	3.01	□□□□□ -1.93
TPM1	YNL079C	SAR1	P20606	190 aa	Known RBP	3.01	□□□□□ -1.93
TPM1	YNL079C	YCR102C	P25608	368 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	ERG9	P29704	444 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	PMT2	P31382	759 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	RNP1	P32385	249 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	KRE6	P32486	720 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	YEL045C	P32616	141 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	RPS0A	P32905	252 aa	Known RBP	3.01	□□□□□ -1.93
TPM1	YNL079C	SFK1	P35735	353 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	QDR3	P38227	689 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	PEX32	P38292	413 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	SDS24	P38314	527 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	HTD2	P38790	280 aa	Known RBP	3.01	□□□□□ -1.93
TPM1	YNL079C	YHR180W	P38868	163 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	YER184C	P39961	794 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	YNL208W	P40159	199 aa	Known RBP	3.01	□□□□□ -1.93
TPM1	YNL079C	YFR054C	P43622	192 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	MNN5	P46982	586 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	DOC1	P53068	250 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	SAY1	P53324	424 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	AIM36	Q03798	255 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	PAL1	Q05518	499 aa	Known RBP	3.01	□□□□□ -1.93
TPM1	YNL079C	BTS1	Q12051	335 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	YOS9	Q99220	542 aa		3.01	□□□□□ -1.93
TPM1	YNL079C	ADK1	P07170	222 aa	Known RBP	3	□□□□□ -1.93
TPM1	YNL079C	ERG24	P32462	438 aa	Known RBP	3	□□□□□ -1.93
TPM1	YNL079C	HSP150	P32478	413 aa		3	□□□□□ -1.93
TPM1	YNL079C	MRPL3	P36516	390 aa		3	□□□□□ -1.93
TPM1	YNL079C	PET100	P38958	111 aa		3	□□□□□ -1.93
TPM1	YNL079C	YIL029C	P40538	142 aa		3	□□□□□ -1.93
TPM1	YNL079C	NAS2	P40555	220 aa		3	□□□□□ -1.93
TPM1	YNL079C	CCC1	P47818	322 aa		3	□□□□□ -1.93
TPM1	YNL079C	YGL204C	P53089	101 aa		3	□□□□□ -1.93
TPM1	YNL079C	NRM1	P53718	249 aa		3	□□□□□ -1.93
TPM1	YNL079C	MRPL50	P53724	139 aa		3	□□□□□ -1.93
TPM1	YNL079C	MEH1	Q02205	184 aa		3	□□□□□ -1.93
TPM1	YNL079C	PEX25	Q02969	394 aa		3	□□□□□ -1.93
TPM1	YNL079C	SNX41	Q04053	625 aa		3	□□□□□ -1.93
TPM1	YNL079C	COA4	Q05809	96 aa		3	□□□□□ -1.93
TPM1	YNL079C	DCR2	Q05924	578 aa		3	□□□□□ -1.93
TPM1	YNL079C	SEI1	Q06058	285 aa		3	□□□□□ -1.93
TPM1	YNL079C	PEX30	Q06169	523 aa		3	□□□□□ -1.93
TPM1	YNL079C	NMA1	Q06178	401 aa	Known RBP	3	□□□□□ -1.93
TPM1	YNL079C	KEI1	Q06346	221 aa		3	□□□□□ -1.93
TPM1	YNL079C	ASR1	Q06834	288 aa		3	□□□□□ -1.93
TPM1	YNL079C	NDE2	Q07500	545 aa		3	□□□□□ -1.93
TPM1	YNL079C	MDM32	Q12171	622 aa		3	□□□□□ -1.93
TPM1	YNL079C	RNH203	Q12338	110 aa		3	□□□□□ -1.93
TPM1	YNL079C	PRP46	Q12417	451 aa	Predicted RBP	3	□□□□□ -1.93
TPM1	YNL079C	YOR343C	Q12484	108 aa		3	□□□□□ -1.93
TPM1	YNL079C	HTZ1	Q12692	134 aa	Known RBP	3	□□□□□ -1.93
TPM1	YNL079C	NHP6B	P11633	99 aa	Known RBP	2.99	□□□□□ -1.93
TPM1	YNL079C	LDB16	P25587	256 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	SPT10	P35208	640 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	YHR122W	P38829	231 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	COX14	P39103	70 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	PRE5	P40302	234 aa	Known RBP	2.99	□□□□□ -1.93
TPM1	YNL079C	YJR085C	P47131	105 aa	Known RBP	2.99	□□□□□ -1.93
TPM1	YNL079C	AIM25	P47140	327 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	BRR6	P53062	197 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	SCS7	Q03529	384 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	PLP1	Q04004	230 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	BNA7	Q04066	261 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	COX20	Q04935	205 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	YLR283W	Q05867	314 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	IRC19	Q07843	230 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	IRC25	Q07951	179 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	RTC5	Q12108	567 aa	Known RBP	2.99	□□□□□ -1.93
TPM1	YNL079C	YRA1	Q12159	226 aa	Known RBP	2.99	□□□□□ -1.93
TPM1	YNL079C	YIL046W-A	Q3E7Z4	54 aa		2.99	□□□□□ -1.93
TPM1	YNL079C	OPI3	P05375	206 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms