RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W YOL024WQ08172 172 aa3.58□□□□□ -1.84
BDP1YNL039W PST1Q12355 444 aa3.58□□□□□ -1.84
BDP1YNL039W HTL1Q9URQ5 78 aa3.58□□□□□ -1.84
BDP1YNL039W YEL009C-AA0A023PZF2 135 aa3.58□□□□□ -1.84
BDP1YNL039W YLR462WO13556 202 aa3.58□□□□□ -1.84
BDP1YNL039W YEL045CP32616 141 aa3.58□□□□□ -1.84
BDP1YNL039W MAK5P38112 773 aaPredicted RBP3.58□□□□□ -1.84
BDP1YNL039W FIG1P38224 298 aa3.58□□□□□ -1.84
BDP1YNL039W TRM7P38238 310 aaKnown RBP3.58□□□□□ -1.84
BDP1YNL039W BDH1P39714 382 aa3.58□□□□□ -1.84
BDP1YNL039W YEL075CP39972 122 aa3.58□□□□□ -1.84
BDP1YNL039W RSM27P53305 110 aa3.58□□□□□ -1.84
BDP1YNL039W YNL247WP53852 767 aaKnown RBP3.58□□□□□ -1.84
BDP1YNL039W ABF2Q02486 183 aa3.58□□□□□ -1.84
BDP1YNL039W YPL247CQ12523 523 aa3.58□□□□□ -1.84
BDP1YNL039W ISD11Q6Q560 94 aa3.58□□□□□ -1.84
BDP1YNL039W PAN1P32521 1480 aa3.58□□□□□ -1.84
BDP1YNL039W ADH1P00330 348 aaKnown RBP3.57□□□□□ -1.84
BDP1YNL039W RPL25P04456 142 aaKnown RBP3.57□□□□□ -1.84
BDP1YNL039W MGT1P26188 188 aa3.57□□□□□ -1.84
BDP1YNL039W ACP1P32463 125 aa3.57□□□□□ -1.84
BDP1YNL039W TCA17P32613 152 aa3.57□□□□□ -1.84
BDP1YNL039W YKR041WP36134 250 aa3.57□□□□□ -1.84
BDP1YNL039W DOG2P38773 246 aa3.57□□□□□ -1.84
BDP1YNL039W DOG1P38774 246 aa3.57□□□□□ -1.84
BDP1YNL039W SPL2P38839 148 aa3.57□□□□□ -1.84
BDP1YNL039W SEO1P39709 593 aa3.57□□□□□ -1.84
BDP1YNL039W RRP17Q04031 235 aaPredicted RBP3.57□□□□□ -1.84
BDP1YNL039W YMR315WQ04869 349 aaKnown RBP3.57□□□□□ -1.84
BDP1YNL039W YLR030WQ07967 263 aa3.57□□□□□ -1.84
BDP1YNL039W NUP157P40064 1391 aaKnown RBP3.56□□□□□ -1.84
BDP1YNL039W AUS1Q08409 1394 aa3.56□□□□□ -1.84
BDP1YNL039W GRX2P17695 143 aaKnown RBP3.56□□□□□ -1.84
BDP1YNL039W TRX3P25372 127 aa3.56□□□□□ -1.84
BDP1YNL039W GRH1Q04410 372 aaKnown RBP3.56□□□□□ -1.84
BDP1YNL039W GGA1Q06336 557 aa3.56□□□□□ -1.84
BDP1YNL039W YDL085C-AQ3E7B7 68 aaKnown RBP3.56□□□□□ -1.84
BDP1YNL039W MEI4P29467 408 aa3.56□□□□□ -1.84
BDP1YNL039W RNP1P32385 249 aa3.56□□□□□ -1.84
BDP1YNL039W MSA2P36157 363 aa3.56□□□□□ -1.84
BDP1YNL039W MEP2P41948 499 aa3.56□□□□□ -1.84
BDP1YNL039W YNL184CP53876 108 aa3.56□□□□□ -1.84
BDP1YNL039W SMD1Q02260 146 aaPredicted RBP3.56□□□□□ -1.84
BDP1YNL039W YMD8Q03697 442 aa3.56□□□□□ -1.84
BDP1YNL039W PEX12Q04370 399 aa3.56□□□□□ -1.84
BDP1YNL039W YLR050CQ12155 161 aaKnown RBP3.56□□□□□ -1.84
BDP1YNL039W YHR214C-EQ8TGK0 99 aa3.56□□□□□ -1.84
BDP1YNL039W CDC7P06243 507 aa3.55□□□□□ -1.84
BDP1YNL039W ERG24P32462 438 aaKnown RBP3.55□□□□□ -1.84
BDP1YNL039W PTM1P32857 523 aa3.55□□□□□ -1.84
BDP1YNL039W CLG1P35190 452 aa3.55□□□□□ -1.84
BDP1YNL039W RMD6P39975 231 aa3.55□□□□□ -1.84
BDP1YNL039W YER076CP40049 302 aa3.55□□□□□ -1.84
BDP1YNL039W COQ5P49017 307 aa3.55□□□□□ -1.84
BDP1YNL039W MDM34P53083 459 aa3.55□□□□□ -1.84
BDP1YNL039W YGR050CP53231 118 aa3.55□□□□□ -1.84
BDP1YNL039W YOL160WQ08321 113 aa3.55□□□□□ -1.84
BDP1YNL039W NIP7Q08962 181 aaKnown RBP3.55□□□□□ -1.84
BDP1YNL039W YPL257WQ08974 193 aa3.55□□□□□ -1.84
BDP1YNL039W YPL264CQ08980 353 aa3.55□□□□□ -1.84
BDP1YNL039W YOR283WQ12040 230 aaKnown RBP3.55□□□□□ -1.84
BDP1YNL039W YOR020W-AQ3E824 90 aa3.55□□□□□ -1.84
BDP1YNL039W RPS19AP07280 144 aaKnown RBP3.54□□□□□ -1.84
BDP1YNL039W RPS19BP07281 144 aaPredicted RBP3.54□□□□□ -1.84
BDP1YNL039W HSP26P15992 214 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
BDP1YNL039W RPF1P38805 295 aaKnown RBP3.54□□□□□ -1.84
BDP1YNL039W RPA43P46669 326 aa3.54□□□□□ -1.84
BDP1YNL039W UBC12P52491 188 aa3.54□□□□□ -1.84
BDP1YNL039W NUP49Q02199 472 aa3.54□□□□□ -1.84
BDP1YNL039W PRR2Q12310 699 aa3.54□□□□□ -1.84
BDP1YNL039W DSF1P0CX08 502 aa3.53□□□□□ -1.84
BDP1YNL039W YNR073CP0CX09 502 aa3.53□□□□□ -1.84
BDP1YNL039W TOM40P23644 387 aaKnown RBP3.53□□□□□ -1.84
BDP1YNL039W YOX1P34161 385 aa3.53□□□□□ -1.84
BDP1YNL039W COG5P53951 403 aa3.53□□□□□ -1.84
BDP1YNL039W HAL1Q01766 294 aa3.53□□□□□ -1.84
BDP1YNL039W TMC1Q08422 150 aaPredicted RBP3.53□□□□□ -1.84
BDP1YNL039W FCY2P17064 533 aa3.53□□□□□ -1.84
BDP1YNL039W MAG1P22134 296 aaKnown RBP3.53□□□□□ -1.84
BDP1YNL039W PCL1P24867 279 aa3.53□□□□□ -1.84
BDP1YNL039W IRC22P40006 225 aa3.53□□□□□ -1.84
BDP1YNL039W HMF1P40037 129 aaKnown RBP3.53□□□□□ -1.84
BDP1YNL039W YGL235WP53071 178 aa3.53□□□□□ -1.84
BDP1YNL039W TSA2Q04120 196 aa3.53□□□□□ -1.84
BDP1YNL039W LPP1Q04396 274 aa3.53□□□□□ -1.84
BDP1YNL039W MRX8Q05473 314 aa3.53□□□□□ -1.84
BDP1YNL039W SIR2P06700 562 aa3.52□□□□□ -1.85
BDP1YNL039W DPM1P14020 267 aaKnown RBP3.52□□□□□ -1.85
BDP1YNL039W CUP2P15315 225 aa3.52□□□□□ -1.85
BDP1YNL039W TRR2P38816 342 aa3.52□□□□□ -1.85
BDP1YNL039W YNL010WP53981 241 aaKnown RBP3.52□□□□□ -1.85
BDP1YNL039W BRX1Q08235 291 aaKnown RBP3.52□□□□□ -1.85
BDP1YNL039W IES3Q12345 250 aa3.52□□□□□ -1.85
BDP1YNL039W GEP5Q12393 293 aa3.52□□□□□ -1.85
BDP1YNL039W NOT5Q12514 560 aaPredicted RBP3.52□□□□□ -1.85
BDP1YNL039W TDA8Q6B2U8 126 aa3.52□□□□□ -1.85
BDP1YNL039W SNF4P12904 322 aa3.51□□□□□ -1.85
BDP1YNL039W ARO7P32178 256 aa3.51□□□□□ -1.85
BDP1YNL039W RCN1P36054 211 aa3.51□□□□□ -1.85
BDP1YNL039W YBR063CP38083 404 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 139.1 ms