RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C HMLALPHA1P0CY07 175 aa4.02□□□□□ -1.77
EAR1YMR171C TIP1P27654 210 aaPredicted RBP4.02□□□□□ -1.77
EAR1YMR171C TRS65P32893 560 aa4.02□□□□□ -1.77
EAR1YMR171C PTR2P32901 601 aa4.02□□□□□ -1.77
EAR1YMR171C SNC2P33328 115 aa4.02□□□□□ -1.77
EAR1YMR171C COS9P36034 407 aa4.02□□□□□ -1.77
EAR1YMR171C RMD6P39975 231 aa4.02□□□□□ -1.77
EAR1YMR171C YIR035CP40579 254 aa4.02□□□□□ -1.77
EAR1YMR171C LSM8P47093 109 aaKnown RBP4.02□□□□□ -1.77
EAR1YMR171C TPC1P53257 314 aa4.02□□□□□ -1.77
EAR1YMR171C OKP1P53298 406 aa4.02□□□□□ -1.77
EAR1YMR171C FMP41P53889 259 aaKnown RBP4.02□□□□□ -1.77
EAR1YMR171C YLR152CP54072 576 aa4.02□□□□□ -1.77
EAR1YMR171C BNA7Q04066 261 aa4.02□□□□□ -1.77
EAR1YMR171C HNT1Q04344 158 aaKnown RBP4.02□□□□□ -1.77
EAR1YMR171C YPD1Q07688 167 aa4.02□□□□□ -1.77
EAR1YMR171C SDO1Q07953 250 aaKnown RBP4.02□□□□□ -1.77
EAR1YMR171C COQ10Q08058 207 aa4.02□□□□□ -1.77
EAR1YMR171C RLM1Q12224 676 aa4.02□□□□□ -1.77
EAR1YMR171C MEX67Q99257 599 aaKnown RBP4.02□□□□□ -1.77
EAR1YMR171C ISN1Q99312 450 aa4.02□□□□□ -1.77
EAR1YMR171C PET20Q99373 253 aa4.02□□□□□ -1.77
EAR1YMR171C CPR4P25334 318 aa4.01□□□□□ -1.77
EAR1YMR171C MSK1P32048 576 aa4.01□□□□□ -1.77
EAR1YMR171C MSN4P33749 630 aa4.01□□□□□ -1.77
EAR1YMR171C SRP102P36057 244 aaPredicted RBP4.01□□□□□ -1.77
EAR1YMR171C FMP46P36141 133 aaKnown RBP4.01□□□□□ -1.77
EAR1YMR171C LYS1P38998 373 aaRIP-Chip data4.01□□□□□ -1.77 RIP-Chip
EAR1YMR171C EMC5P40540 141 aa4.01□□□□□ -1.77
EAR1YMR171C YHC3P47040 408 aa4.01□□□□□ -1.77
EAR1YMR171C SSN8P47821 323 aa4.01□□□□□ -1.77
EAR1YMR171C BXI1P48558 297 aa4.01□□□□□ -1.77
EAR1YMR171C NIF3P53081 288 aa4.01□□□□□ -1.77
EAR1YMR171C MRPL1Q04599 285 aa4.01□□□□□ -1.77
EAR1YMR171C BER1Q06688 274 aaKnown RBP4.01□□□□□ -1.77
EAR1YMR171C HRT1Q08273 121 aa4.01□□□□□ -1.77
EAR1YMR171C TPI1P00942 248 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C PET494P07390 489 aaPredicted RBP4□□□□□ -1.77
EAR1YMR171C RPL20AP0CX23 172 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C RPL20BP0CX24 172 aaPredicted RBP4□□□□□ -1.77
EAR1YMR171C FMT1P32785 401 aa4□□□□□ -1.77
EAR1YMR171C PAD1P33751 242 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
EAR1YMR171C MTR2P34232 184 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C RPL32P38061 130 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C ATP3P38077 311 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C SSH1P38353 490 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C DLS1P40366 167 aa4□□□□□ -1.77
EAR1YMR171C UFD1P53044 361 aa4□□□□□ -1.77
EAR1YMR171C BUD25P85052 153 aa4□□□□□ -1.77
EAR1YMR171C EGD1Q02642 157 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C YML018CQ03730 393 aa4□□□□□ -1.77
EAR1YMR171C CAB5Q03941 241 aa4□□□□□ -1.77
EAR1YMR171C FIT1Q04433 528 aa4□□□□□ -1.77
EAR1YMR171C RDR1Q08904 546 aa4□□□□□ -1.77
EAR1YMR171C SRL2Q12020 392 aa4□□□□□ -1.77
EAR1YMR171C SRO7Q12038 1033 aa4□□□□□ -1.77
EAR1YMR171C SET6Q12529 373 aa4□□□□□ -1.77
EAR1YMR171C YLR146W-AQ2V2P1 62 aa4□□□□□ -1.77
EAR1YMR171C CMC2Q3E7A4 109 aa4□□□□□ -1.77
EAR1YMR171C FAB1P34756 2278 aa4□□□□□ -1.77
EAR1YMR171C CDC7P06243 507 aa4□□□□□ -1.77
EAR1YMR171C HNM1P19807 563 aa4□□□□□ -1.77
EAR1YMR171C CPR2P23285 205 aa4□□□□□ -1.77
EAR1YMR171C PET18P25362 215 aa4□□□□□ -1.77
EAR1YMR171C TRR1P29509 319 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C VMA5P31412 392 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C POP8P38208 133 aa4□□□□□ -1.77
EAR1YMR171C RPL13BP40212 199 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C NAS2P40555 220 aa4□□□□□ -1.77
EAR1YMR171C MPP6P53725 186 aaPredicted RBP4□□□□□ -1.77
EAR1YMR171C YNL234WP53857 426 aa4□□□□□ -1.77
EAR1YMR171C FYV6P53913 173 aa4□□□□□ -1.77
EAR1YMR171C APJ1P53940 528 aa4□□□□□ -1.77
EAR1YMR171C YCL001W-AP87012 153 aa4□□□□□ -1.77
EAR1YMR171C NCE101Q02820 53 aa4□□□□□ -1.77
EAR1YMR171C YMR279CQ03263 540 aa4□□□□□ -1.77
EAR1YMR171C EKI1Q03764 534 aa4□□□□□ -1.77
EAR1YMR171C YDR248CQ03786 193 aa4□□□□□ -1.77
EAR1YMR171C RVB1Q03940 463 aaKnown RBP4□□□□□ -1.77
EAR1YMR171C MDM30Q05930 598 aa4□□□□□ -1.77
EAR1YMR171C VAM3Q12241 283 aa4□□□□□ -1.77
EAR1YMR171C RPL13AQ12690 199 aaPredicted RBP4□□□□□ -1.77
EAR1YMR171C MSW1P04803 379 aa3.99□□□□□ -1.77
EAR1YMR171C RPS14AP06367 137 aaKnown RBP3.99□□□□□ -1.77
EAR1YMR171C STE18P18852 110 aa3.99□□□□□ -1.77
EAR1YMR171C APA2P22108 325 aa3.99□□□□□ -1.77
EAR1YMR171C PPH21P23594 369 aa3.99□□□□□ -1.77
EAR1YMR171C KRR1P25586 316 aaPredicted RBP3.99□□□□□ -1.77
EAR1YMR171C ERG3P32353 365 aa3.99□□□□□ -1.77
EAR1YMR171C YHR180WP38868 163 aa3.99□□□□□ -1.77
EAR1YMR171C GPI16P38875 610 aa3.99□□□□□ -1.77
EAR1YMR171C RPS14BP39516 138 aaKnown RBP3.99□□□□□ -1.77
EAR1YMR171C YIL067CP40514 678 aa3.99□□□□□ -1.77
EAR1YMR171C HXT14P42833 540 aa3.99□□□□□ -1.77
EAR1YMR171C NSE4P43124 402 aa3.99□□□□□ -1.77
EAR1YMR171C YJR141WP47172 347 aaPredicted RBP3.99□□□□□ -1.77
EAR1YMR171C PDR16P53860 351 aaKnown RBP3.99□□□□□ -1.77
EAR1YMR171C SNO1Q03144 224 aa3.99□□□□□ -1.77
EAR1YMR171C SYM1Q06563 197 aa3.99□□□□□ -1.77
EAR1YMR171C RRT7Q07829 113 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms