RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W YDR114CQ04597 100 aa3.16□□□□□ -1.9
YML040WYML040W BBP1Q12365 385 aa3.16□□□□□ -1.9
YML040WYML040W SEC4P07560 215 aaKnown RBP3.15□□□□□ -1.91
YML040WYML040W RPL27AP0C2H6 136 aaKnown RBP3.15□□□□□ -1.91
YML040WYML040W RPL27BP0C2H7 136 aaKnown RBP3.15□□□□□ -1.91
YML040WYML040W RSA4P25382 515 aaKnown RBP3.15□□□□□ -1.91
YML040WYML040W TCA17P32613 152 aa3.15□□□□□ -1.91
YML040WYML040W YCR087C-AP37263 153 aa3.15□□□□□ -1.91
YML040WYML040W SDH4P37298 181 aa3.15□□□□□ -1.91
YML040WYML040W TIF34P40217 347 aaKnown RBP3.15□□□□□ -1.91
YML040WYML040W YDR248CQ03786 193 aa3.15□□□□□ -1.91
YML040WYML040W GRH1Q04410 372 aaKnown RBP3.15□□□□□ -1.91
YML040WYML040W YPL257WQ08974 193 aa3.15□□□□□ -1.91
YML040WYML040W SMD3P43321 101 aaKnown RBP3.14□□□□□ -1.91
YML040WYML040W YJR056CP47115 236 aa3.14□□□□□ -1.91
YML040WYML040W YML096WQ04489 525 aa3.14□□□□□ -1.91
YML040WYML040W LSO2Q3E772 92 aaKnown RBP3.14□□□□□ -1.91
YML040WYML040W DSF1P0CX08 502 aa3.13□□□□□ -1.91
YML040WYML040W YNR073CP0CX09 502 aa3.13□□□□□ -1.91
YML040WYML040W GCN3P14741 305 aa3.13□□□□□ -1.91
YML040WYML040W SPS18P32572 300 aa3.13□□□□□ -1.91
YML040WYML040W APS1P35181 156 aa3.13□□□□□ -1.91
YML040WYML040W ECM33P38248 429 aaKnown RBP3.13□□□□□ -1.91
YML040WYML040W IRC22P40006 225 aa3.13□□□□□ -1.91
YML040WYML040W YJR141WP47172 347 aaPredicted RBP3.13□□□□□ -1.91
YML040WYML040W YGL088WP53151 121 aa3.13□□□□□ -1.91
YML040WYML040W ABF2Q02486 183 aa3.13□□□□□ -1.91
YML040WYML040W PET191Q02772 108 aa3.13□□□□□ -1.91
YML040WYML040W YMR279CQ03263 540 aa3.13□□□□□ -1.91
YML040WYML040W PEX12Q04370 399 aa3.13□□□□□ -1.91
YML040WYML040W PRM7Q12459 698 aa3.13□□□□□ -1.91
YML040WYML040W YOR020W-AQ3E824 90 aa3.13□□□□□ -1.91
YML040WYML040W RAD9P14737 1309 aa3.12□□□□□ -1.91
YML040WYML040W Q0255P03881 472 aa3.12□□□□□ -1.91
YML040WYML040W MER1P16523 270 aa3.12□□□□□ -1.91
YML040WYML040W YGP1P38616 354 aaKnown RBP3.12□□□□□ -1.91
YML040WYML040W GRE3P38715 327 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
YML040WYML040W YHR125WP38831 101 aa3.12□□□□□ -1.91
YML040WYML040W CTR2P38865 189 aa3.12□□□□□ -1.91
YML040WYML040W COG3P40094 801 aa3.12□□□□□ -1.91
YML040WYML040W YJL016WP47072 561 aa3.12□□□□□ -1.91
YML040WYML040W DRS2P39524 1355 aa3.11□□□□□ -1.91
YML040WYML040W MIG1P27705 504 aa3.11□□□□□ -1.91
YML040WYML040W ARC15P40518 154 aaRIP-Chip data3.11□□□□□ -1.91not detected
YML040WYML040W PRM8P53174 237 aa3.11□□□□□ -1.91
YML040WYML040W YNL010WP53981 241 aaKnown RBP3.11□□□□□ -1.91
YML040WYML040W YML108WQ03759 105 aa3.11□□□□□ -1.91
YML040WYML040W SAS5Q99314 248 aa3.11□□□□□ -1.91
YML040WYML040W MRPL28P36527 147 aa3.1□□□□□ -1.91
YML040WYML040W YBR063CP38083 404 aa3.1□□□□□ -1.91
YML040WYML040W DOG2P38773 246 aa3.1□□□□□ -1.91
YML040WYML040W DOG1P38774 246 aa3.1□□□□□ -1.91
YML040WYML040W RSM25P40496 264 aa3.1□□□□□ -1.91
YML040WYML040W FIS1P40515 155 aa3.1□□□□□ -1.91
YML040WYML040W YJL144WP47009 104 aa3.1□□□□□ -1.91
YML040WYML040W SSU72P53538 206 aaPredicted RBP3.1□□□□□ -1.91
YML040WYML040W RPL26AP05743 127 aaKnown RBP3.09□□□□□ -1.91
YML040WYML040W FCY2P17064 533 aa3.09□□□□□ -1.91
YML040WYML040W CCA1P21269 546 aa3.09□□□□□ -1.91
YML040WYML040W RPL26BP53221 127 aaKnown RBP3.09□□□□□ -1.91
YML040WYML040W FAB1P34756 2278 aa3.08□□□□□ -1.92
YML040WYML040W NOP1P15646 327 aaKnown RBP3.08□□□□□ -1.92
YML040WYML040W SCO1P23833 295 aa3.08□□□□□ -1.92
YML040WYML040W YGR050CP53231 118 aa3.08□□□□□ -1.92
YML040WYML040W LPP1Q04396 274 aa3.08□□□□□ -1.92
YML040WYML040W GGA1Q06336 557 aa3.08□□□□□ -1.92
YML040WYML040W GRX2P17695 143 aaKnown RBP3.07□□□□□ -1.92
YML040WYML040W YAR068WP39564 161 aa3.07□□□□□ -1.92
YML040WYML040W YER188WP40103 239 aa3.07□□□□□ -1.92
YML040WYML040W YJR146WP47174 117 aa3.07□□□□□ -1.92
YML040WYML040W ATG39Q06159 398 aa3.07□□□□□ -1.92
YML040WYML040W CDD1Q06549 142 aa3.07□□□□□ -1.92
YML040WYML040W PSF1Q12488 208 aa3.07□□□□□ -1.92
YML040WYML040W CDC7P06243 507 aa3.06□□□□□ -1.92
YML040WYML040W ADH3P07246 375 aaKnown RBP3.06□□□□□ -1.92
YML040WYML040W YHR032W-AP0C5N6 59 aa3.06□□□□□ -1.92
YML040WYML040W ATP7P30902 174 aa3.06□□□□□ -1.92
YML040WYML040W YKR032WP36127 104 aa3.06□□□□□ -1.92
YML040WYML040W TRM5P38793 499 aa3.06□□□□□ -1.92
YML040WYML040W MMS2P53152 137 aa3.06□□□□□ -1.92
YML040WYML040W LSM7P53905 115 aaKnown RBP3.06□□□□□ -1.92
YML040WYML040W APJ1P53940 528 aa3.06□□□□□ -1.92
YML040WYML040W YMD8Q03697 442 aa3.06□□□□□ -1.92
YML040WYML040W YNG1Q08465 219 aa3.06□□□□□ -1.92
YML040WYML040W CLP1Q08685 445 aaPredicted RBP3.06□□□□□ -1.92
YML040WYML040W RPL9AP05738 191 aaKnown RBP3.05□□□□□ -1.92
YML040WYML040W SCM4P32564 187 aa3.05□□□□□ -1.92
YML040WYML040W SEC17P32602 292 aa3.05□□□□□ -1.92
YML040WYML040W RPL9BP51401 191 aaKnown RBP3.05□□□□□ -1.92
YML040WYML040W DIA1P54005 336 aa3.05□□□□□ -1.92
YML040WYML040W HRT1Q08273 121 aa3.05□□□□□ -1.92
YML040WYML040W AKR2Q12013 749 aa3.05□□□□□ -1.92
YML040WYML040W USB1Q12208 290 aaKnown RBP3.05□□□□□ -1.92
YML040WYML040W TDA8Q6B2U8 126 aa3.05□□□□□ -1.92
YML040WYML040W REP2P03872 296 aa3.04□□□□□ -1.92
YML040WYML040W YPR170W-BP0C5R9 85 aa3.04□□□□□ -1.92
YML040WYML040W POP4P38336 279 aa3.04□□□□□ -1.92
YML040WYML040W YER034WP40022 185 aaKnown RBP3.04□□□□□ -1.92
YML040WYML040W MRPL49P40858 161 aaPredicted RBP3.04□□□□□ -1.92
YML040WYML040W YGR026WP53217 278 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms