RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W RIO1Q12196 484 aaKnown RBP2.51□□□□□ -2.01
VMA5YKL080W RAX2Q12465 1220 aa2.51□□□□□ -2.01
VMA5YKL080W YAL067W-AQ8TGK6 75 aa2.51□□□□□ -2.01
VMA5YKL080W RPS19AP07280 144 aaKnown RBP2.5□□□□□ -2.01
VMA5YKL080W RPS19BP07281 144 aaPredicted RBP2.5□□□□□ -2.01
VMA5YKL080W SEC4P07560 215 aaKnown RBP2.5□□□□□ -2.01
VMA5YKL080W PUT1P09368 476 aa2.5□□□□□ -2.01
VMA5YKL080W YOL163WP0CF20 169 aa2.5□□□□□ -2.01
VMA5YKL080W SNF4P12904 322 aa2.5□□□□□ -2.01
VMA5YKL080W YCR025CP25352 136 aa2.5□□□□□ -2.01
VMA5YKL080W SPS18P32572 300 aa2.5□□□□□ -2.01
VMA5YKL080W MAK5P38112 773 aaPredicted RBP2.5□□□□□ -2.01
VMA5YKL080W ECM13P38195 257 aa2.5□□□□□ -2.01
VMA5YKL080W FIG1P38224 298 aa2.5□□□□□ -2.01
VMA5YKL080W DOG2P38773 246 aa2.5□□□□□ -2.01
VMA5YKL080W DOG1P38774 246 aa2.5□□□□□ -2.01
VMA5YKL080W RMD6P39975 231 aa2.5□□□□□ -2.01
VMA5YKL080W CAT5P41735 233 aa2.5□□□□□ -2.01
VMA5YKL080W COQ5P49017 307 aa2.5□□□□□ -2.01
VMA5YKL080W NUP49Q02199 472 aa2.5□□□□□ -2.01
VMA5YKL080W GGA1Q06336 557 aa2.5□□□□□ -2.01
VMA5YKL080W YOL024WQ08172 172 aa2.5□□□□□ -2.01
VMA5YKL080W YDL211CQ12121 372 aa2.5□□□□□ -2.01
VMA5YKL080W MRS1P07266 363 aa2.49□□□□□ -2.01
VMA5YKL080W GCY1P14065 312 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
VMA5YKL080W CUP2P15315 225 aa2.49□□□□□ -2.01
VMA5YKL080W HSP26P15992 214 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01 RIP-Chip
VMA5YKL080W FCY2P17064 533 aa2.49□□□□□ -2.01
VMA5YKL080W SRP102P36057 244 aaPredicted RBP2.49□□□□□ -2.01
VMA5YKL080W SKG1P36169 355 aa2.49□□□□□ -2.01
VMA5YKL080W SEO1P39709 593 aa2.49□□□□□ -2.01
VMA5YKL080W HMF1P40037 129 aaKnown RBP2.49□□□□□ -2.01
VMA5YKL080W YFL012WP43580 148 aa2.49□□□□□ -2.01
VMA5YKL080W YJL028WP47062 111 aa2.49□□□□□ -2.01
VMA5YKL080W ERV29P53337 310 aa2.49□□□□□ -2.01
VMA5YKL080W COS6P53344 381 aa2.49□□□□□ -2.01
VMA5YKL080W COG5P53951 403 aa2.49□□□□□ -2.01
VMA5YKL080W MAK3Q03503 176 aa2.49□□□□□ -2.01
VMA5YKL080W GRH1Q04410 372 aaKnown RBP2.49□□□□□ -2.01
VMA5YKL080W MRX8Q05473 314 aa2.49□□□□□ -2.01
VMA5YKL080W SUE1Q06524 206 aa2.49□□□□□ -2.01
VMA5YKL080W NSL1Q12143 216 aa2.49□□□□□ -2.01
VMA5YKL080W IES3Q12345 250 aa2.49□□□□□ -2.01
VMA5YKL080W NUP157P40064 1391 aaKnown RBP2.49□□□□□ -2.01
VMA5YKL080W CMD1P06787 147 aaKnown RBP2.48□□□□□ -2.01
VMA5YKL080W CPT1P17898 393 aa2.48□□□□□ -2.01
VMA5YKL080W SEC14P24280 304 aaKnown RBP2.48□□□□□ -2.01
VMA5YKL080W OAC1P32332 324 aa2.48□□□□□ -2.01
VMA5YKL080W MRPS9P38120 278 aa2.48□□□□□ -2.01
VMA5YKL080W RPF1P38805 295 aaKnown RBP2.48□□□□□ -2.01
VMA5YKL080W LSM4P40070 187 aaKnown RBP2.48□□□□□ -2.01
VMA5YKL080W TIF34P40217 347 aaKnown RBP2.48□□□□□ -2.01
VMA5YKL080W FIS1P40515 155 aa2.48□□□□□ -2.01
VMA5YKL080W LSM1P47017 172 aaKnown RBP2.48□□□□□ -2.01
VMA5YKL080W YNL010WP53981 241 aaKnown RBP2.48□□□□□ -2.01
VMA5YKL080W OSH6Q02201 448 aa2.48□□□□□ -2.01
VMA5YKL080W ARO80Q04052 950 aa2.48□□□□□ -2.01
VMA5YKL080W HPT1Q04178 221 aaKnown RBP2.48□□□□□ -2.01
VMA5YKL080W YLR031WQ07978 186 aa2.48□□□□□ -2.01
VMA5YKL080W YPL264CQ08980 353 aa2.48□□□□□ -2.01
VMA5YKL080W YOL085CQ99345 113 aa2.48□□□□□ -2.01
VMA5YKL080W IGO2Q9P305 131 aa2.48□□□□□ -2.01
VMA5YKL080W AUS1Q08409 1394 aa2.48□□□□□ -2.01
VMA5YKL080W CCH1P50077 2039 aa2.47□□□□□ -2.01
VMA5YKL080W TRX3P25372 127 aa2.47□□□□□ -2.01
VMA5YKL080W ERG24P32462 438 aaKnown RBP2.47□□□□□ -2.01
VMA5YKL080W TCA17P32613 152 aa2.47□□□□□ -2.01
VMA5YKL080W PTM1P32857 523 aa2.47□□□□□ -2.01
VMA5YKL080W YBR063CP38083 404 aa2.47□□□□□ -2.01
VMA5YKL080W YER121WP40076 114 aa2.47□□□□□ -2.01
VMA5YKL080W YGR018CP53211 109 aa2.47□□□□□ -2.01
VMA5YKL080W SMD1Q02260 146 aaPredicted RBP2.47□□□□□ -2.01
VMA5YKL080W YMR315WQ04869 349 aaKnown RBP2.47□□□□□ -2.01
VMA5YKL080W GRX8Q05926 109 aa2.47□□□□□ -2.01
VMA5YKL080W USB1Q12208 290 aaKnown RBP2.47□□□□□ -2.01
VMA5YKL080W PRR2Q12310 699 aa2.47□□□□□ -2.01
VMA5YKL080W CDC7P06243 507 aa2.46□□□□□ -2.02
VMA5YKL080W RPS28BP0C0X0 67 aaKnown RBP2.46□□□□□ -2.02
VMA5YKL080W DPM1P14020 267 aaKnown RBP2.46□□□□□ -2.02
VMA5YKL080W GRX2P17695 143 aaKnown RBP2.46□□□□□ -2.02
VMA5YKL080W COX10P21592 462 aa2.46□□□□□ -2.02
VMA5YKL080W CNB1P25296 175 aa2.46□□□□□ -2.02
VMA5YKL080W RPB9P27999 122 aa2.46□□□□□ -2.02
VMA5YKL080W RCN1P36054 211 aa2.46□□□□□ -2.02
VMA5YKL080W POP7P38291 140 aa2.46□□□□□ -2.02
VMA5YKL080W DER1P38307 211 aa2.46□□□□□ -2.02
VMA5YKL080W TRR2P38816 342 aa2.46□□□□□ -2.02
VMA5YKL080W BDH1P39714 382 aa2.46□□□□□ -2.02
VMA5YKL080W AST2P39945 430 aaKnown RBP2.46□□□□□ -2.02
VMA5YKL080W YFR045WP43617 309 aa2.46□□□□□ -2.02
VMA5YKL080W BUD13P46947 266 aaPredicted RBP2.46□□□□□ -2.02
VMA5YKL080W OST2P46964 130 aa2.46□□□□□ -2.02
VMA5YKL080W AIM25P47140 327 aa2.46□□□□□ -2.02
VMA5YKL080W YPL039WQ03080 316 aa2.46□□□□□ -2.02
VMA5YKL080W YPR011CQ12251 326 aa2.46□□□□□ -2.02
VMA5YKL080W TIM22Q12328 207 aa2.46□□□□□ -2.02
VMA5YKL080W RDI1Q12434 202 aa2.46□□□□□ -2.02
VMA5YKL080W YPL247CQ12523 523 aa2.46□□□□□ -2.02
VMA5YKL080W RPS28AQ3E7X9 67 aaPredicted RBP2.46□□□□□ -2.02
VMA5YKL080W YBL112CQ3E7Y4 105 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms