RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C YHR214C-EQ8TGK0 99 aa1.86□□□□□ -2.11
UFD4YKL010C YUH1P35127 236 aa1.86□□□□□ -2.11
UFD4YKL010C LAG1P38703 411 aa1.86□□□□□ -2.11
UFD4YKL010C WSS1P38838 269 aa1.86□□□□□ -2.11
UFD4YKL010C TIF34P40217 347 aaKnown RBP1.86□□□□□ -2.11
UFD4YKL010C DUG1P43616 481 aaKnown RBP1.86□□□□□ -2.11
UFD4YKL010C UBX6P47049 396 aa1.86□□□□□ -2.11
UFD4YKL010C OGG1P53397 376 aaPredicted RBP1.86□□□□□ -2.11
UFD4YKL010C BUD25P85052 153 aa1.86□□□□□ -2.11
UFD4YKL010C RSM10Q03201 203 aa1.86□□□□□ -2.11
UFD4YKL010C TMA23Q03525 211 aa1.86□□□□□ -2.11
UFD4YKL010C NNT1Q05874 261 aa1.86□□□□□ -2.11
UFD4YKL010C HRI1Q05905 244 aaKnown RBP1.86□□□□□ -2.11
UFD4YKL010C TMA10Q06177 86 aa1.86□□□□□ -2.11
UFD4YKL010C DXO1Q06349 442 aa1.86□□□□□ -2.11
UFD4YKL010C HRT1Q08273 121 aa1.86□□□□□ -2.11
UFD4YKL010C COA2Q3E823 68 aa1.86□□□□□ -2.11
UFD4YKL010C UTP20P35194 2493 aaKnown RBP1.86□□□□□ -2.11
UFD4YKL010C YML003WP0CF16 290 aa1.86□□□□□ -2.11
UFD4YKL010C ERG2P32352 222 aa1.86□□□□□ -2.11
UFD4YKL010C HSP150P32478 413 aa1.86□□□□□ -2.11
UFD4YKL010C HOG1P32485 435 aa1.86□□□□□ -2.11
UFD4YKL010C SWD2P36104 329 aaPredicted RBP1.86□□□□□ -2.11
UFD4YKL010C VPS51P36116 164 aa1.86□□□□□ -2.11
UFD4YKL010C UBS1P38290 277 aa1.86□□□□□ -2.11
UFD4YKL010C UMP1P38293 148 aa1.86□□□□□ -2.11
UFD4YKL010C RMD6P39975 231 aa1.86□□□□□ -2.11
UFD4YKL010C YER010CP40011 234 aa1.86□□□□□ -2.11
UFD4YKL010C SHR5P41912 237 aa1.86□□□□□ -2.11
UFD4YKL010C CIS3P47001 227 aa1.86□□□□□ -2.11
UFD4YKL010C MGA1P53050 456 aa1.86□□□□□ -2.11
UFD4YKL010C YGL185CP53100 379 aa1.86□□□□□ -2.11
UFD4YKL010C YGL117WP53133 265 aa1.86□□□□□ -2.11
UFD4YKL010C CTF19Q02732 369 aa1.86□□□□□ -2.11
UFD4YKL010C PEX25Q02969 394 aa1.86□□□□□ -2.11
UFD4YKL010C YMR279CQ03263 540 aa1.86□□□□□ -2.11
UFD4YKL010C INP1Q03694 420 aa1.86□□□□□ -2.11
UFD4YKL010C YFT2Q06676 274 aa1.86□□□□□ -2.11
UFD4YKL010C YOR292CQ08743 309 aa1.86□□□□□ -2.11
UFD4YKL010C ODC2Q99297 307 aa1.86□□□□□ -2.11
UFD4YKL010C UBA3Q99344 299 aa1.86□□□□□ -2.11
UFD4YKL010C KIN28P06242 306 aa1.85□□□□□ -2.11
UFD4YKL010C SPS4P09937 338 aa1.85□□□□□ -2.11
UFD4YKL010C YMR31P19955 123 aa1.85□□□□□ -2.11
UFD4YKL010C SAG1P20840 650 aa1.85□□□□□ -2.11
UFD4YKL010C RPB7P34087 171 aa1.85□□□□□ -2.11
UFD4YKL010C YOX1P34161 385 aa1.85□□□□□ -2.11
UFD4YKL010C YBR292CP38357 123 aa1.85□□□□□ -2.11
UFD4YKL010C PRS3P38689 320 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C YFR054CP43622 192 aa1.85□□□□□ -2.11
UFD4YKL010C SSN8P47821 323 aa1.85□□□□□ -2.11
UFD4YKL010C ATG21Q02887 496 aa1.85□□□□□ -2.11
UFD4YKL010C YLR179CQ06252 201 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C YOL029CQ08187 201 aa1.85□□□□□ -2.11
UFD4YKL010C RDI1Q12434 202 aa1.85□□□□□ -2.11
UFD4YKL010C YSF3P0C074 85 aaPredicted RBP1.85□□□□□ -2.11
UFD4YKL010C MAG1P22134 296 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C SPT10P35208 640 aa1.85□□□□□ -2.11
UFD4YKL010C SSH1P38353 490 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C MED6P38782 295 aa1.85□□□□□ -2.11
UFD4YKL010C YFL054CP43549 646 aa1.85□□□□□ -2.11
UFD4YKL010C YJR120WP47157 116 aa1.85□□□□□ -2.11
UFD4YKL010C BNS1P50084 137 aa1.85□□□□□ -2.11
UFD4YKL010C YGR042WP53227 271 aa1.85□□□□□ -2.11
UFD4YKL010C ATC1Q04005 294 aa1.85□□□□□ -2.11
UFD4YKL010C ALG6Q12001 544 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C PRR2Q12310 699 aa1.85□□□□□ -2.11
UFD4YKL010C MES1P00958 751 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C RPS13P05756 151 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C CDC7P06243 507 aa1.85□□□□□ -2.11
UFD4YKL010C RPL1AP0CX43 217 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C RPL1BP0CX44 217 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C OCH1P31755 480 aa1.85□□□□□ -2.11
UFD4YKL010C MRP20P32387 263 aa1.85□□□□□ -2.11
UFD4YKL010C ACP1P32463 125 aa1.85□□□□□ -2.11
UFD4YKL010C EHT1P38295 451 aa1.85□□□□□ -2.11
UFD4YKL010C ARC40P38328 384 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C IMD2P38697 523 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C YGR269WP40326 108 aa1.85□□□□□ -2.11
UFD4YKL010C SLM1P40485 686 aa1.85□□□□□ -2.11
UFD4YKL010C YJR111CP47148 283 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C HCH1P53834 153 aa1.85□□□□□ -2.11
UFD4YKL010C CTS2Q06350 511 aa1.85□□□□□ -2.11
UFD4YKL010C STP4Q07351 490 aa1.85□□□□□ -2.11
UFD4YKL010C MED4Q12343 284 aa1.85□□□□□ -2.11
UFD4YKL010C EAF3Q12432 401 aa1.85□□□□□ -2.11
UFD4YKL010C CDC36P06100 191 aaPredicted RBP1.85□□□□□ -2.11
UFD4YKL010C SSA3P09435 649 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C PAU19P0CE85 124 aa1.85□□□□□ -2.11
UFD4YKL010C PAU21P0CE86 164 aa1.85□□□□□ -2.11
UFD4YKL010C PAU22P0CE87 164 aa1.85□□□□□ -2.11
UFD4YKL010C OLE1P21147 510 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C PAU3P25610 124 aa1.85□□□□□ -2.11
UFD4YKL010C MSK1P32048 576 aa1.85□□□□□ -2.11
UFD4YKL010C VAM7P32912 316 aa1.85□□□□□ -2.11
UFD4YKL010C MRPL4P36517 319 aa1.85□□□□□ -2.11
UFD4YKL010C ATP3P38077 311 aaKnown RBP1.85□□□□□ -2.11
UFD4YKL010C GRE3P38715 327 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
UFD4YKL010C NAS2P40555 220 aa1.85□□□□□ -2.11
UFD4YKL010C EGT2P42835 1041 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms