RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W PRM15Q03262 622 aa2.53□□□□□ -2
SNX4YJL036W YMD8Q03697 442 aa2.53□□□□□ -2
SNX4YJL036W FUS2Q05670 677 aa2.53□□□□□ -2
SNX4YJL036W YET3Q07451 203 aa2.53□□□□□ -2
SNX4YJL036W YLR030WQ07967 263 aa2.53□□□□□ -2
SNX4YJL036W YNG1Q08465 219 aa2.53□□□□□ -2
SNX4YJL036W YPL257WQ08974 193 aa2.53□□□□□ -2
SNX4YJL036W EMP46Q12396 444 aa2.53□□□□□ -2
SNX4YJL036W LSO2Q3E772 92 aaKnown RBP2.53□□□□□ -2
SNX4YJL036W DSF1P0CX08 502 aa2.52□□□□□ -2.01
SNX4YJL036W YNR073CP0CX09 502 aa2.52□□□□□ -2.01
SNX4YJL036W RPL35AP0CX84 120 aaKnown RBP2.52□□□□□ -2.01
SNX4YJL036W RPL35BP0CX85 120 aaKnown RBP2.52□□□□□ -2.01
SNX4YJL036W MID2P36027 376 aa2.52□□□□□ -2.01
SNX4YJL036W VPS51P36116 164 aa2.52□□□□□ -2.01
SNX4YJL036W YGP1P38616 354 aaKnown RBP2.52□□□□□ -2.01
SNX4YJL036W POG1P40473 351 aa2.52□□□□□ -2.01
SNX4YJL036W YJR056CP47115 236 aa2.52□□□□□ -2.01
SNX4YJL036W GTR2P53290 341 aa2.52□□□□□ -2.01
SNX4YJL036W HST4P53688 370 aa2.52□□□□□ -2.01
SNX4YJL036W YPR063CQ12160 140 aa2.52□□□□□ -2.01
SNX4YJL036W MDM32Q12171 622 aa2.52□□□□□ -2.01
SNX4YJL036W GEP5Q12393 293 aa2.52□□□□□ -2.01
SNX4YJL036W YOR020W-AQ3E824 90 aa2.52□□□□□ -2.01
SNX4YJL036W YHR139C-AO13536 103 aa2.51□□□□□ -2.01
SNX4YJL036W ZWF1P11412 505 aaKnown RBP2.51□□□□□ -2.01
SNX4YJL036W TOM40P23644 387 aaKnown RBP2.51□□□□□ -2.01
SNX4YJL036W RCN1P36054 211 aa2.51□□□□□ -2.01
SNX4YJL036W ECM33P38248 429 aaKnown RBP2.51□□□□□ -2.01
SNX4YJL036W SHG1P38337 142 aa2.51□□□□□ -2.01
SNX4YJL036W DOG2P38773 246 aa2.51□□□□□ -2.01
SNX4YJL036W DOG1P38774 246 aa2.51□□□□□ -2.01
SNX4YJL036W COG3P40094 801 aa2.51□□□□□ -2.01
SNX4YJL036W ABF2Q02486 183 aa2.51□□□□□ -2.01
SNX4YJL036W GRH1Q04410 372 aaKnown RBP2.51□□□□□ -2.01
SNX4YJL036W IKI3Q06706 1349 aaKnown RBP2.5□□□□□ -2.01
SNX4YJL036W RPL25P04456 142 aaKnown RBP2.5□□□□□ -2.01
SNX4YJL036W RAD10P06838 210 aa2.5□□□□□ -2.01
SNX4YJL036W PTM1P32857 523 aa2.5□□□□□ -2.01
SNX4YJL036W TKL2P33315 681 aa2.5□□□□□ -2.01
SNX4YJL036W COS8P38723 381 aa2.5□□□□□ -2.01
SNX4YJL036W YAR068WP39564 161 aa2.5□□□□□ -2.01
SNX4YJL036W RMD6P39975 231 aa2.5□□□□□ -2.01
SNX4YJL036W YIL059CP40520 121 aa2.5□□□□□ -2.01
SNX4YJL036W YIR035CP40579 254 aa2.5□□□□□ -2.01
SNX4YJL036W PFS2P42841 465 aaKnown RBP2.5□□□□□ -2.01
SNX4YJL036W AIM25P47140 327 aa2.5□□□□□ -2.01
SNX4YJL036W NIP7Q08962 181 aaKnown RBP2.5□□□□□ -2.01
SNX4YJL036W YPR170W-BP0C5R9 85 aa2.49□□□□□ -2.01
SNX4YJL036W GCY1P14065 312 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SNX4YJL036W FCY2P17064 533 aa2.49□□□□□ -2.01
SNX4YJL036W FIS1P40515 155 aa2.49□□□□□ -2.01
SNX4YJL036W YIP3P53633 176 aa2.49□□□□□ -2.01
SNX4YJL036W RTC4P53850 401 aa2.49□□□□□ -2.01
SNX4YJL036W LSM7P53905 115 aaKnown RBP2.49□□□□□ -2.01
SNX4YJL036W SNO1Q03144 224 aa2.49□□□□□ -2.01
SNX4YJL036W NOC4Q06512 552 aaPredicted RBP2.49□□□□□ -2.01
SNX4YJL036W USB1Q12208 290 aaKnown RBP2.49□□□□□ -2.01
SNX4YJL036W AGC1Q12482 902 aa2.49□□□□□ -2.01
SNX4YJL036W NOT5Q12514 560 aaPredicted RBP2.49□□□□□ -2.01
SNX4YJL036W YHR214C-EQ8TGK0 99 aa2.49□□□□□ -2.01
SNX4YJL036W IGO2Q9P305 131 aa2.49□□□□□ -2.01
SNX4YJL036W FAB1P34756 2278 aa2.48□□□□□ -2.01
SNX4YJL036W MRS1P07266 363 aa2.48□□□□□ -2.01
SNX4YJL036W SEC4P07560 215 aaKnown RBP2.48□□□□□ -2.01
SNX4YJL036W SGA1P08019 549 aa2.48□□□□□ -2.01
SNX4YJL036W TRR1P29509 319 aaKnown RBP2.48□□□□□ -2.01
SNX4YJL036W TCA17P32613 152 aa2.48□□□□□ -2.01
SNX4YJL036W YBR063CP38083 404 aa2.48□□□□□ -2.01
SNX4YJL036W RPF1P38805 295 aaKnown RBP2.48□□□□□ -2.01
SNX4YJL036W SRP14P38985 146 aa2.48□□□□□ -2.01
SNX4YJL036W AST2P39945 430 aaKnown RBP2.48□□□□□ -2.01
SNX4YJL036W RPA43P46669 326 aa2.48□□□□□ -2.01
SNX4YJL036W BUD13P46947 266 aaPredicted RBP2.48□□□□□ -2.01
SNX4YJL036W EFM5P53200 248 aaKnown RBP2.48□□□□□ -2.01
SNX4YJL036W PET191Q02772 108 aa2.48□□□□□ -2.01
SNX4YJL036W YDR114CQ04597 100 aa2.48□□□□□ -2.01
SNX4YJL036W FCF1Q05498 189 aaPredicted RBP2.48□□□□□ -2.01
SNX4YJL036W YLR036CQ07986 203 aa2.48□□□□□ -2.01
SNX4YJL036W HIS3P06633 220 aa2.47□□□□□ -2.01
SNX4YJL036W ADH3P07246 375 aaKnown RBP2.47□□□□□ -2.01
SNX4YJL036W PUT1P09368 476 aa2.47□□□□□ -2.01
SNX4YJL036W PDS1P40316 373 aaPredicted RBP2.47□□□□□ -2.01
SNX4YJL036W OST2P46964 130 aa2.47□□□□□ -2.01
SNX4YJL036W GON7P46984 123 aa2.47□□□□□ -2.01
SNX4YJL036W NRK1P53915 240 aa2.47□□□□□ -2.01
SNX4YJL036W DID2P69771 204 aa2.47□□□□□ -2.01
SNX4YJL036W GAS3Q03655 524 aa2.47□□□□□ -2.01
SNX4YJL036W LPP1Q04396 274 aa2.47□□□□□ -2.01
SNX4YJL036W GRX8Q05926 109 aa2.47□□□□□ -2.01
SNX4YJL036W ATG39Q06159 398 aa2.47□□□□□ -2.01
SNX4YJL036W YOL160WQ08321 113 aa2.47□□□□□ -2.01
SNX4YJL036W TDA8Q6B2U8 126 aa2.47□□□□□ -2.01
SNX4YJL036W TRX3P25372 127 aa2.46□□□□□ -2.02
SNX4YJL036W ATG22P25568 528 aa2.46□□□□□ -2.02
SNX4YJL036W TAH1P25638 111 aaPredicted RBP2.46□□□□□ -2.02
SNX4YJL036W YHR125WP38831 101 aa2.46□□□□□ -2.02
SNX4YJL036W IRC22P40006 225 aa2.46□□□□□ -2.02
SNX4YJL036W HMF1P40037 129 aaKnown RBP2.46□□□□□ -2.02
SNX4YJL036W ARC15P40518 154 aaRIP-Chip data2.46□□□□□ -2.02not detected
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms