RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C GNA1P43577 159 aaPredicted RBP2.96□□□□□ -1.94
VPS53YJL029C PHB2P50085 310 aa2.96□□□□□ -1.94
VPS53YJL029C YGL114WP53134 725 aa2.96□□□□□ -1.94
VPS53YJL029C OKP1P53298 406 aa2.96□□□□□ -1.94
VPS53YJL029C FRE5Q08908 694 aa2.96□□□□□ -1.94
VPS53YJL029C BBP1Q12365 385 aa2.96□□□□□ -1.94
VPS53YJL029C MET17P06106 444 aa2.96□□□□□ -1.94
VPS53YJL029C BGL2P15703 313 aaKnown RBP2.96□□□□□ -1.94
VPS53YJL029C PCL6P40038 420 aa2.96□□□□□ -1.94
VPS53YJL029C YER079WP40052 210 aaKnown RBP2.96□□□□□ -1.94
VPS53YJL029C AVT6P40074 448 aa2.96□□□□□ -1.94
VPS53YJL029C YJL218WP40892 196 aaKnown RBP2.96□□□□□ -1.94
VPS53YJL029C RAI1P53063 387 aaKnown RBP2.96□□□□□ -1.94
VPS53YJL029C RIM9Q04734 239 aa2.96□□□□□ -1.94
VPS53YJL029C GPN3Q06543 272 aa2.96□□□□□ -1.94
VPS53YJL029C NGL1Q08213 363 aaKnown RBP2.96□□□□□ -1.94
VPS53YJL029C YDL009CQ12210 107 aa2.96□□□□□ -1.94
VPS53YJL029C YEL009C-AA0A023PZF2 135 aa2.95□□□□□ -1.94
VPS53YJL029C RPL25P04456 142 aaKnown RBP2.95□□□□□ -1.94
VPS53YJL029C ERG24P32462 438 aaKnown RBP2.95□□□□□ -1.94
VPS53YJL029C SPS18P32572 300 aa2.95□□□□□ -1.94
VPS53YJL029C FLO10P36170 1169 aa2.95□□□□□ -1.94
VPS53YJL029C CTR2P38865 189 aa2.95□□□□□ -1.94
VPS53YJL029C AIM20P40451 204 aa2.95□□□□□ -1.94
VPS53YJL029C DIE2P50076 525 aa2.95□□□□□ -1.94
VPS53YJL029C SSK1Q07084 712 aa2.95□□□□□ -1.94
VPS53YJL029C STP4Q07351 490 aa2.95□□□□□ -1.94
VPS53YJL029C YOR186WQ08560 144 aa2.95□□□□□ -1.94
VPS53YJL029C YLR108CQ12259 485 aa2.95□□□□□ -1.94
VPS53YJL029C MPD1Q12404 318 aaKnown RBP2.95□□□□□ -1.94
VPS53YJL029C YMR105W-AQ8TGS8 64 aa2.95□□□□□ -1.94
VPS53YJL029C URA2P07259 2214 aaKnown RBP2.95□□□□□ -1.94
VPS53YJL029C ADK1P07170 222 aaKnown RBP2.95□□□□□ -1.94
VPS53YJL029C RFA1P22336 621 aaKnown RBP2.95□□□□□ -1.94
VPS53YJL029C IMP1P28627 190 aa2.95□□□□□ -1.94
VPS53YJL029C ARO7P32178 256 aa2.95□□□□□ -1.94
VPS53YJL029C MSS1P32559 526 aaPredicted RBP2.95□□□□□ -1.94
VPS53YJL029C CBT1P36038 271 aaPredicted RBP2.95□□□□□ -1.94
VPS53YJL029C BMT5P40493 336 aa2.95□□□□□ -1.94
VPS53YJL029C GWT1P47026 490 aa2.95□□□□□ -1.94
VPS53YJL029C HNT1Q04344 158 aaKnown RBP2.95□□□□□ -1.94
VPS53YJL029C YMR252CQ04814 134 aa2.95□□□□□ -1.94
VPS53YJL029C RBS1Q05672 457 aaKnown RBP2.95□□□□□ -1.94
VPS53YJL029C DGK1Q12382 290 aa2.95□□□□□ -1.94
VPS53YJL029C RAX2Q12465 1220 aa2.95□□□□□ -1.94
VPS53YJL029C YLR099W-AQ3E798 87 aa2.95□□□□□ -1.94
VPS53YJL029C ATG40Q99325 256 aa2.95□□□□□ -1.94
VPS53YJL029C GCN4P03069 281 aa2.94□□□□□ -1.94
VPS53YJL029C PET18P25362 215 aa2.94□□□□□ -1.94
VPS53YJL029C MTC7P32633 139 aa2.94□□□□□ -1.94
VPS53YJL029C UMP1P38293 148 aa2.94□□□□□ -1.94
VPS53YJL029C NTC20P38302 140 aaPredicted RBP2.94□□□□□ -1.94
VPS53YJL029C ATF1P40353 525 aa2.94□□□□□ -1.94
VPS53YJL029C DUG3P53871 357 aa2.94□□□□□ -1.94
VPS53YJL029C CTF19Q02732 369 aa2.94□□□□□ -1.94
VPS53YJL029C STD1Q02794 444 aa2.94□□□□□ -1.94
VPS53YJL029C SRL4Q03085 281 aa2.94□□□□□ -1.94
VPS53YJL029C UTP15Q04305 513 aaKnown RBP2.94□□□□□ -1.94
VPS53YJL029C HEM25Q07534 307 aa2.94□□□□□ -1.94
VPS53YJL029C HUT1Q12520 339 aa2.94□□□□□ -1.94
VPS53YJL029C HIS3P06633 220 aa2.94□□□□□ -1.94
VPS53YJL029C PET54P10834 293 aa2.94□□□□□ -1.94
VPS53YJL029C ATG22P25568 528 aa2.94□□□□□ -1.94
VPS53YJL029C MBA1P38300 278 aa2.94□□□□□ -1.94
VPS53YJL029C GPI14P47088 403 aaKnown RBP2.94□□□□□ -1.94
VPS53YJL029C DOC1P53068 250 aa2.94□□□□□ -1.94
VPS53YJL029C MRPL13Q02204 264 aa2.94□□□□□ -1.94
VPS53YJL029C NGL2Q03264 515 aaKnown RBP2.94□□□□□ -1.94
VPS53YJL029C PRP3Q03338 469 aaPredicted RBP2.94□□□□□ -1.94
VPS53YJL029C CAC2Q04199 468 aa2.94□□□□□ -1.94
VPS53YJL029C NOC4Q06512 552 aaPredicted RBP2.94□□□□□ -1.94
VPS53YJL029C MDM36Q06820 579 aa2.94□□□□□ -1.94
VPS53YJL029C ILV5P06168 395 aaKnown RBP2.93□□□□□ -1.94
VPS53YJL029C PHO85P17157 305 aa2.93□□□□□ -1.94
VPS53YJL029C TOM40P23644 387 aaKnown RBP2.93□□□□□ -1.94
VPS53YJL029C CNE1P27825 502 aa2.93□□□□□ -1.94
VPS53YJL029C RIB7P33312 244 aa2.93□□□□□ -1.94
VPS53YJL029C PIR5P46999 287 aa2.93□□□□□ -1.94
VPS53YJL029C TTI2P47168 421 aa2.93□□□□□ -1.94
VPS53YJL029C IMO32P53219 342 aa2.93□□□□□ -1.94
VPS53YJL029C WSC2P53832 503 aa2.93□□□□□ -1.94
VPS53YJL029C YDR286CQ05530 114 aa2.93□□□□□ -1.94
VPS53YJL029C MSA1Q08471 629 aa2.93□□□□□ -1.94
VPS53YJL029C ARO4P32449 370 aaKnown RBP2.93□□□□□ -1.94
VPS53YJL029C ADH5P38113 351 aaKnown RBP2.93□□□□□ -1.94
VPS53YJL029C FIG1P38224 298 aa2.93□□□□□ -1.94
VPS53YJL029C CUE1P38428 203 aa2.93□□□□□ -1.94
VPS53YJL029C NOP16P40007 231 aaKnown RBP2.93□□□□□ -1.94
VPS53YJL029C LSM1P47017 172 aaKnown RBP2.93□□□□□ -1.94
VPS53YJL029C YJL118WP47022 219 aa2.93□□□□□ -1.94
VPS53YJL029C MAK3Q03503 176 aa2.93□□□□□ -1.94
VPS53YJL029C MRPL35Q06678 367 aa2.93□□□□□ -1.94
VPS53YJL029C SRL1Q08673 210 aa2.93□□□□□ -1.94
VPS53YJL029C YLR122CQ12312 125 aa2.93□□□□□ -1.94
VPS53YJL029C EAF3Q12432 401 aa2.93□□□□□ -1.94
VPS53YJL029C AAC1P04710 309 aa2.92□□□□□ -1.94
VPS53YJL029C RAD52P06778 471 aaKnown RBP2.92□□□□□ -1.94
VPS53YJL029C FUS3P16892 353 aaKnown RBP2.92□□□□□ -1.94
VPS53YJL029C YUH1P35127 236 aa2.92□□□□□ -1.94
VPS53YJL029C YKL063CP35725 167 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 197.4 ms