RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C DSE2P38844 325 aa1.82□□□□□ -2.12
RUB1YDR139C YJR149WP47177 404 aa1.82□□□□□ -2.12
RUB1YDR139C YML108WQ03759 105 aa1.82□□□□□ -2.12
RUB1YDR139C TPO4Q12256 659 aa1.82□□□□□ -2.12
RUB1YDR139C DDI2P0CH63 225 aa1.81□□□□□ -2.12
RUB1YDR139C DDI3P0CH64 225 aa1.81□□□□□ -2.12
RUB1YDR139C MSN4P33749 630 aa1.81□□□□□ -2.12
RUB1YDR139C PEX17P40155 199 aa1.81□□□□□ -2.12
RUB1YDR139C TRM9P49957 279 aa1.81□□□□□ -2.12
RUB1YDR139C NSA1P53136 463 aaPredicted RBP1.81□□□□□ -2.12
RUB1YDR139C ERV29P53337 310 aa1.81□□□□□ -2.12
RUB1YDR139C CFT1Q06632 1357 aaKnown RBP1.81□□□□□ -2.12
RUB1YDR139C YHR139C-AO13536 103 aa1.8□□□□□ -2.12
RUB1YDR139C CDC8P00572 216 aa1.8□□□□□ -2.12
RUB1YDR139C BCY1P07278 416 aaKnown RBP1.8□□□□□ -2.12
RUB1YDR139C CDC10P25342 322 aaKnown RBP1.8□□□□□ -2.12
RUB1YDR139C VPS21P36017 210 aaKnown RBP1.8□□□□□ -2.12
RUB1YDR139C YMD8Q03697 442 aa1.8□□□□□ -2.12
RUB1YDR139C MATALPHA1P0CY06 175 aa1.79□□□□□ -2.12
RUB1YDR139C HMLALPHA1P0CY07 175 aa1.79□□□□□ -2.12
RUB1YDR139C NTF2P33331 125 aaKnown RBP1.79□□□□□ -2.12
RUB1YDR139C SVP26P38869 228 aa1.79□□□□□ -2.12
RUB1YDR139C RPC17P47076 161 aa1.79□□□□□ -2.12
RUB1YDR139C LIA1P47120 325 aaKnown RBP1.79□□□□□ -2.12
RUB1YDR139C TOS8P53147 276 aa1.79□□□□□ -2.12
RUB1YDR139C DCN1Q12395 269 aa1.79□□□□□ -2.12
RUB1YDR139C LSO2Q3E772 92 aaKnown RBP1.79□□□□□ -2.12
RUB1YDR139C SPT3P06844 337 aa1.78□□□□□ -2.12
RUB1YDR139C PET9P18239 318 aaKnown RBP1.78□□□□□ -2.12
RUB1YDR139C YER135CP40082 130 aa1.78□□□□□ -2.12
RUB1YDR139C COX15P40086 486 aa1.78□□□□□ -2.12
RUB1YDR139C PRE6P40303 254 aaKnown RBP1.78□□□□□ -2.12
RUB1YDR139C AGE2P40529 298 aa1.78□□□□□ -2.12
RUB1YDR139C YNR062CP53748 327 aa1.78□□□□□ -2.12
RUB1YDR139C DID2P69771 204 aa1.78□□□□□ -2.12
RUB1YDR139C YPR170W-BP0C5R9 85 aa1.77□□□□□ -2.13
RUB1YDR139C DOG2P38773 246 aa1.77□□□□□ -2.13
RUB1YDR139C AVT2P39981 480 aa1.77□□□□□ -2.13
RUB1YDR139C RPL33BP41056 107 aaKnown RBP1.77□□□□□ -2.13
RUB1YDR139C NOP13P53883 403 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
RUB1YDR139C YNL010WP53981 241 aaKnown RBP1.77□□□□□ -2.13
RUB1YDR139C BUD25P85052 153 aa1.77□□□□□ -2.13
RUB1YDR139C PSF1Q12488 208 aa1.77□□□□□ -2.13
RUB1YDR139C YOL162WP0CF19 215 aa1.76□□□□□ -2.13
RUB1YDR139C MEI4P29467 408 aa1.76□□□□□ -2.13
RUB1YDR139C PGD1P40356 397 aa1.76□□□□□ -2.13
RUB1YDR139C TRM12Q04235 462 aa1.76□□□□□ -2.13
RUB1YDR139C DRS2P39524 1355 aa1.75□□□□□ -2.13
RUB1YDR139C SSO1P32867 290 aa1.75□□□□□ -2.13
RUB1YDR139C IRC22P40006 225 aa1.75□□□□□ -2.13
RUB1YDR139C YER085CP40058 173 aa1.75□□□□□ -2.13
RUB1YDR139C ICE2P40499 491 aa1.75□□□□□ -2.13
RUB1YDR139C LPP1Q04396 274 aa1.75□□□□□ -2.13
RUB1YDR139C SML1Q04964 104 aa1.75□□□□□ -2.13
RUB1YDR139C URA6P15700 204 aa1.74□□□□□ -2.13
RUB1YDR139C YBR219CP38317 127 aa1.74□□□□□ -2.13
RUB1YDR139C TIR3P40552 269 aa1.74□□□□□ -2.13
RUB1YDR139C MIC26P50087 233 aa1.74□□□□□ -2.13
RUB1YDR139C AIF1P52923 378 aa1.74□□□□□ -2.13
RUB1YDR139C FYV6P53913 173 aa1.74□□□□□ -2.13
RUB1YDR139C CDC123Q05791 360 aa1.74□□□□□ -2.13
RUB1YDR139C REP2P03872 296 aa1.73□□□□□ -2.13
RUB1YDR139C RHO1P06780 209 aaKnown RBP1.73□□□□□ -2.13
RUB1YDR139C RPL24BP24000 155 aaKnown RBP1.73□□□□□ -2.13
RUB1YDR139C ATG22P25568 528 aa1.73□□□□□ -2.13
RUB1YDR139C VMA6P32366 345 aaKnown RBP1.73□□□□□ -2.13
RUB1YDR139C YKR045CP36138 183 aa1.73□□□□□ -2.13
RUB1YDR139C PRM8P53174 237 aa1.73□□□□□ -2.13
RUB1YDR139C SPG3Q04398 127 aaPredicted RBP1.73□□□□□ -2.13
RUB1YDR139C SRY1P36007 326 aa1.72□□□□□ -2.13
RUB1YDR139C POP4P38336 279 aa1.72□□□□□ -2.13
RUB1YDR139C URA8P38627 578 aaPredicted RBP1.72□□□□□ -2.13
RUB1YDR139C SNZ1Q03148 297 aa1.72□□□□□ -2.13
RUB1YDR139C THP2O13539 261 aaKnown RBP1.71□□□□□ -2.14
RUB1YDR139C CDC28P00546 298 aaKnown RBP1.71□□□□□ -2.14
RUB1YDR139C RPL27BP0C2H7 136 aaKnown RBP1.71□□□□□ -2.14
RUB1YDR139C YMR31P19955 123 aa1.71□□□□□ -2.14
RUB1YDR139C MRPS28P21771 286 aa1.71□□□□□ -2.14
RUB1YDR139C YGL010WP25338 174 aa1.71□□□□□ -2.14
RUB1YDR139C PPA2P28239 310 aa1.71□□□□□ -2.14
RUB1YDR139C MIC12P38341 106 aa1.71□□□□□ -2.14
RUB1YDR139C BRR6P53062 197 aa1.71□□□□□ -2.14
RUB1YDR139C BOL2P53082 120 aa1.71□□□□□ -2.14
RUB1YDR139C YDR248CQ03786 193 aa1.71□□□□□ -2.14
RUB1YDR139C YLR156WP0CE96 114 aa1.7□□□□□ -2.14
RUB1YDR139C YLR159WP0CE97 114 aa1.7□□□□□ -2.14
RUB1YDR139C YLR161WP0CE98 114 aa1.7□□□□□ -2.14
RUB1YDR139C FZF1P32805 299 aa1.7□□□□□ -2.14
RUB1YDR139C MRPL28P36527 147 aa1.7□□□□□ -2.14
RUB1YDR139C YNL217WP40152 326 aa1.7□□□□□ -2.14
RUB1YDR139C FLO9P39712 1322 aa1.69□□□□□ -2.14
RUB1YDR139C RPL28P02406 149 aaKnown RBP1.69□□□□□ -2.14
RUB1YDR139C BMH2P34730 273 aaKnown RBP1.69□□□□□ -2.14
RUB1YDR139C YBR220CP38318 560 aa1.69□□□□□ -2.14
RUB1YDR139C FAR7P43592 221 aa1.69□□□□□ -2.14
RUB1YDR139C BXI1P48558 297 aa1.69□□□□□ -2.14
RUB1YDR139C ALG13P53178 202 aa1.69□□□□□ -2.14
RUB1YDR139C MZM1Q03429 123 aaPredicted RBP1.69□□□□□ -2.14
RUB1YDR139C YLR162WQ06235 118 aa1.69□□□□□ -2.14
RUB1YDR139C CSI2Q08054 341 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms