RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C EMC5P40540 141 aa0.98□□□□□ -2.25
VAM6YDL077C VMA21P41806 77 aa0.98□□□□□ -2.25
VAM6YDL077C PFA3P42836 336 aa0.98□□□□□ -2.25
VAM6YDL077C SPG5P42933 373 aa0.98□□□□□ -2.25
VAM6YDL077C CIN2P46670 268 aa0.98□□□□□ -2.25
VAM6YDL077C TAD2P47058 250 aa0.98□□□□□ -2.25
VAM6YDL077C AMA1P50082 593 aa0.98□□□□□ -2.25
VAM6YDL077C MUP1P50276 574 aa0.98□□□□□ -2.25
VAM6YDL077C YGL114WP53134 725 aa0.98□□□□□ -2.25
VAM6YDL077C PRM8P53174 237 aa0.98□□□□□ -2.25
VAM6YDL077C PNC1P53184 216 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C LST7P53237 242 aa0.98□□□□□ -2.25
VAM6YDL077C YGR079WP53249 370 aa0.98□□□□□ -2.25
VAM6YDL077C PAU12P53343 120 aa0.98□□□□□ -2.25
VAM6YDL077C ASI3P53983 676 aa0.98□□□□□ -2.25
VAM6YDL077C LSM3P57743 89 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C HHT1P61830 136 aa0.98□□□□□ -2.25
VAM6YDL077C COX12Q01519 83 aa0.98□□□□□ -2.25
VAM6YDL077C TRI1Q05024 226 aa0.98□□□□□ -2.25
VAM6YDL077C NUT2Q06213 157 aa0.98□□□□□ -2.25
VAM6YDL077C KEI1Q06346 221 aa0.98□□□□□ -2.25
VAM6YDL077C YPR027CQ12079 277 aa0.98□□□□□ -2.25
VAM6YDL077C ERG27Q12452 347 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C PAR32Q12515 295 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C YBR255C-AQ3E776 120 aa0.98□□□□□ -2.25
VAM6YDL077C COX3P00420 269 aa0.97□□□□□ -2.25
VAM6YDL077C SUC2P00724 532 aa0.97□□□□□ -2.25
VAM6YDL077C MES1P00958 751 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C SRD1P09007 221 aa0.97□□□□□ -2.25
VAM6YDL077C YLL053CP0CD98 152 aa0.97□□□□□ -2.25
VAM6YDL077C YOL163WP0CF20 169 aa0.97□□□□□ -2.25
VAM6YDL077C RPL1AP0CX43 217 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C RPL1BP0CX44 217 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C OLE1P21147 510 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C POT1P27796 417 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
VAM6YDL077C ERG3P32353 365 aa0.97□□□□□ -2.25
VAM6YDL077C HXT4P32467 576 aa0.97□□□□□ -2.25
VAM6YDL077C PAU2P32612 120 aa0.97□□□□□ -2.25
VAM6YDL077C UGX2P32772 223 aa0.97□□□□□ -2.25
VAM6YDL077C THI80P35202 319 aa0.97□□□□□ -2.25
VAM6YDL077C YKL151CP36059 337 aa0.97□□□□□ -2.25
VAM6YDL077C ASC1P38011 319 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C MIX23P38162 196 aa0.97□□□□□ -2.25
VAM6YDL077C LDB7P38210 180 aa0.97□□□□□ -2.25
VAM6YDL077C ECM33P38248 429 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C ARP1P38696 384 aa0.97□□□□□ -2.25
VAM6YDL077C RPL14BP38754 138 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C RPB11P38902 120 aa0.97□□□□□ -2.25
VAM6YDL077C AXL2P38928 823 aa0.97□□□□□ -2.25
VAM6YDL077C UME6P39001 836 aa0.97□□□□□ -2.25
VAM6YDL077C BDH1P39714 382 aa0.97□□□□□ -2.25
VAM6YDL077C YEL057CP39983 233 aa0.97□□□□□ -2.25
VAM6YDL077C MIT1P40002 666 aa0.97□□□□□ -2.25
VAM6YDL077C PUG1P40100 303 aa0.97□□□□□ -2.25
VAM6YDL077C GPP2P40106 250 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C OSW5P40219 148 aa0.97□□□□□ -2.25
VAM6YDL077C DLS1P40366 167 aa0.97□□□□□ -2.25
VAM6YDL077C APQ12P40532 138 aa0.97□□□□□ -2.25
VAM6YDL077C GPP1P41277 250 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C SMK1P41808 388 aa0.97□□□□□ -2.25
VAM6YDL077C POP1P41812 875 aa0.97□□□□□ -2.25
VAM6YDL077C SFH5P47008 294 aa0.97□□□□□ -2.25
VAM6YDL077C RRT6P53117 311 aaPredicted RBP0.97□□□□□ -2.25
VAM6YDL077C VPS73P53142 486 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C RPN14P53196 417 aa0.97□□□□□ -2.25
VAM6YDL077C THG1P53215 237 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C FRE4P53746 719 aa0.97□□□□□ -2.25
VAM6YDL077C SNO2P53823 222 aa0.97□□□□□ -2.25
VAM6YDL077C AIM11P87275 137 aa0.97□□□□□ -2.25
VAM6YDL077C OAZ1Q02803 292 aa0.97□□□□□ -2.25
VAM6YDL077C YMR178WQ03219 274 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C MSS11Q03825 758 aa0.97□□□□□ -2.25
VAM6YDL077C NAT4Q04751 285 aa0.97□□□□□ -2.25
VAM6YDL077C BLS1Q06071 122 aa0.97□□□□□ -2.25
VAM6YDL077C YLR179CQ06252 201 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C AIM39Q08223 395 aa0.97□□□□□ -2.25
VAM6YDL077C BSC6Q08280 497 aa0.97□□□□□ -2.25
VAM6YDL077C VTS1Q08831 523 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
VAM6YDL077C YPL162CQ12042 273 aa0.97□□□□□ -2.25
VAM6YDL077C NUS1Q12063 375 aa0.97□□□□□ -2.25
VAM6YDL077C SWT1Q12104 458 aa0.97□□□□□ -2.25
VAM6YDL077C YDL177CQ12257 170 aa0.97□□□□□ -2.25
VAM6YDL077C EAF3Q12432 401 aa0.97□□□□□ -2.25
VAM6YDL077C IZH2Q12442 317 aa0.97□□□□□ -2.25
VAM6YDL077C PCL9Q12477 304 aa0.97□□□□□ -2.25
VAM6YDL077C ZPS1Q12512 249 aa0.97□□□□□ -2.25
VAM6YDL077C YLR361C-AQ3E795 98 aa0.97□□□□□ -2.25
VAM6YDL077C TAD3Q9URQ3 322 aa0.97□□□□□ -2.25
VAM6YDL077C Q0010Q9ZZX9 128 aa0.97□□□□□ -2.25
VAM6YDL077C LAA1P39526 2014 aa0.97□□□□□ -2.25
VAM6YDL077C ILV1P00927 576 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C DED1P06634 604 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C RPS18AP0CX55 146 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C RPS18BP0CX56 146 aaPredicted RBP0.97□□□□□ -2.25
VAM6YDL077C SCH9P11792 824 aaKnown RBP0.97□□□□□ -2.25
VAM6YDL077C POX1P13711 748 aa0.97□□□□□ -2.25
VAM6YDL077C STE4P18851 423 aa0.97□□□□□ -2.25
VAM6YDL077C RPB8P20436 146 aa0.97□□□□□ -2.25
VAM6YDL077C YCL068CP25593 260 aa0.97□□□□□ -2.25
VAM6YDL077C YCR100CP25606 316 aa0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 85.4 ms