RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	SCL1	P21243	252 aa	Known RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	CNB1	P25296	175 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	SUI1	P32911	108 aa	Known RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	SPT10	P35208	640 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	COS9	P36034	407 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	YKL071W	P36086	256 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	YPC1	P38298	316 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	DED81	P38707	554 aa	Known RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	GEP4	P38812	185 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	TRR2	P38816	342 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	IKI1	P38874	309 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	ASP1	P38986	381 aa	Predicted RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	MST28	P39552	234 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	GCV3	P39726	170 aa	Predicted RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	SSO2	P39926	295 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	PGD1	P40356	397 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	POG1	P40473	351 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	LSM8	P47093	109 aa	Known RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	SSN8	P47821	323 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	DOC1	P53068	250 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	YGL204C	P53089	101 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	VHT1	P53241	593 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	SYF2	P53277	215 aa	Predicted RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	RSM27	P53305	110 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	MSO1	P53604	210 aa	Known RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	HNT1	Q04344	158 aa	Known RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	KEI1	Q06346	221 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	DXO1	Q06349	442 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	ATG10	Q07879	167 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	TIM18	Q08749	192 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	TIR4	Q12218	487 aa	Predicted RBP	2.92	□□□□□ -1.94
CMD1	YBR109C	YRM1	Q12340	786 aa		2.92	□□□□□ -1.94
CMD1	YBR109C	TDH2	P00358	332 aa	Known RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	MSW1	P04803	379 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	PUT1	P09368	476 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	CPR1	P14832	162 aa	Known RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	FPR1	P20081	114 aa	Known RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	CKS1	P20486	150 aa	Known RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	ACP1	P32463	125 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	MSN4	P33749	630 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	SRP102	P36057	244 aa	Predicted RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	TAE1	P38340	232 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	not detected
CMD1	YBR109C	KRE9	P39005	276 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	GAT2	P40209	560 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	SLM1	P40485	686 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	AVT7	P40501	490 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	YIL067C	P40514	678 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	YPS6	P40583	537 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	OST1	P41543	476 aa	Known RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	CAT5	P41735	233 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	SNN1	P48232	102 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	YGL235W	P53071	178 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	MAL12	P53341	584 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	HHO1	P53551	258 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	FYV6	P53913	173 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	ACT1	P60010	375 aa	Known RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	RHO3	Q00245	231 aa	Known RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	YPL113C	Q02961	396 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	SNX41	Q04053	625 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	MRX8	Q05473	314 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	GAS2	Q06135	555 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	BER1	Q06688	274 aa	Known RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	BRX1	Q08235	291 aa	Known RBP	2.91	□□□□□ -1.94
CMD1	YBR109C	YOR385W	Q08909	290 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	SRL2	Q12020	392 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	ATP14	Q12349	124 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	YGL194C-A	Q2V2P6	80 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	YCL021W-A	Q96VH3	125 aa		2.91	□□□□□ -1.94
CMD1	YBR109C	KIN28	P06242	306 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	ADK1	P07170	222 aa	Known RBP	2.9	□□□□□ -1.95
CMD1	YBR109C	PHO2	P07269	559 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	UBI4	P0CG63	381 aa	Known RBP	2.9	□□□□□ -1.95
CMD1	YBR109C	RPL40A	P0CH08	128 aa	Known RBP	2.9	□□□□□ -1.95
CMD1	YBR109C	RPL40B	P0CH09	128 aa	Known RBP	2.9	□□□□□ -1.95
CMD1	YBR109C	MATALPHA1	P0CY06	175 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	HMLALPHA1	P0CY07	175 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	URA6	P15700	204 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	RFA3	P26755	122 aa	Known RBP	2.9	□□□□□ -1.95
CMD1	YBR109C	YEF1	P32622	495 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	TIM12	P32830	109 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	SNC2	P33328	115 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	YKL162C	P36052	402 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	PAN3	P36102	679 aa	Predicted RBP	2.9	□□□□□ -1.95
CMD1	YBR109C	MIX23	P38162	196 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	MED6	P38782	295 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	SEN34	P39707	275 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	DLS1	P40366	167 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	GTT1	P40582	234 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	CIN2	P46670	268 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	COQ5	P49017	307 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	UFD1	P53044	361 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	VEL1	P53058	206 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	EGD1	Q02642	157 aa	Known RBP	2.9	□□□□□ -1.95
CMD1	YBR109C	PEX25	Q02969	394 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	BET5	Q03630	159 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	BNA7	Q04066	261 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	SMA2	Q04658	369 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	HNT3	Q08702	217 aa		2.9	□□□□□ -1.95
CMD1	YBR109C	PCC1	Q3E833	88 aa		2.9	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms