RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 MAN1C1Q9NR34 630 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 DPP7Q9UHL4 492 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 CDH22Q9UJ99 828 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 CPSF3Q9UKF6 684 aaKnown RBP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 AGO2Q9UKV8 859 aaKnown RBP16.37■□□□□ 0.21
PHGDH-231ENST00000641939 DENND4AQ7Z401 1863 aa16.37■□□□□ 0.21
PHGDH-231ENST00000641939 LOC730098B7Z3J9 87 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 ADRB2P07550 413 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 MYBP10242 640 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 FGFR3P22607 806 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 BRCC3P46736 316 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 CASP5P51878 434 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 KCNA1Q09470 495 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 POSTNQ15063 836 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 PSMD5Q16401 504 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 ATAT1Q5SQI0 421 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 KANK3Q6NY19 840 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 TMC5Q6UXY8 1006 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 PALB2Q86YC2 1186 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 CD302Q8IX05 232 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 HDAC7Q8WUI4 952 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 POMGNT1Q8WZA1 660 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 RPGRIP1Q96KN7 1286 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 TSPAN18Q96SJ8 248 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 C7orf25Q9BPX7 421 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 IKZF4Q9H2S9 585 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 TUBGCP4Q9UGJ1 667 aa16.36■□□□□ 0.21
PHGDH-231ENST00000641939 TRIOO75962 3097 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 I3L4J1 428 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 TGM5O43548 720 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 XPOTO43592 962 aaKnown RBP16.35■□□□□ 0.21
PHGDH-231ENST00000641939 WEE2P0C1S8 567 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 CYP3A5P20815 502 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 ADSSP30520 456 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 ACOT2P49753 483 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 ASIC1P78348 528 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 SPAG1Q07617 926 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 ZBTB6Q15916 424 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 SYCP3Q8IZU3 236 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 CMASQ8NFW8 434 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-231ENST00000641939 FAM212AQ96EL1 285 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 CHAMP1Q96JM3 812 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 CLSTN3Q9BQT9 956 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 FGFBP2Q9BYJ0 223 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 PLEKHA4Q9H4M7 779 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 POMKQ9H5K3 350 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 EPHX3Q9H6B9 360 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 KCNH3Q9ULD8 1083 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 UBQLN1Q9UMX0 589 aaKnown RBP16.35■□□□□ 0.21
PHGDH-231ENST00000641939 NUB1Q9Y5A7 615 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 SCN1AP35498 2009 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 DOCK6Q96HP0 2047 aa16.35■□□□□ 0.21
PHGDH-231ENST00000641939 PI4K2BG5E9Z4 385 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 SPATA31D3P0C874 917 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 CMA1P23946 247 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 TKTP29401 623 aaKnown RBP16.34■□□□□ 0.21
PHGDH-231ENST00000641939 LRPAP1P30533 357 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 POU5F1Q01860 360 aaKnown RBP16.34■□□□□ 0.21
PHGDH-231ENST00000641939 LILRA6Q6PI73 481 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 SPATA31D4Q6ZUB0 917 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 STXBP4Q6ZWJ1 553 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 GPR149Q86SP6 731 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 C1QTNF1Q9BXJ1 281 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 SCAND2PQ9GZW5 306 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-231ENST00000641939 TMEM206Q9H813 350 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 NR2E1Q9Y466 385 aa16.34■□□□□ 0.21
PHGDH-231ENST00000641939 SYN3O14994 580 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 PRPF6O94906 941 aaKnown RBP16.33■□□□□ 0.2
PHGDH-231ENST00000641939 ALADP13716 330 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 JADE1Q6IE81 842 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 C15orf39Q6ZRI6 1047 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 ANKS3Q6ZW76 656 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 UNC13DQ70J99 1090 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 RNF135Q8IUD6 432 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 CEP57L1Q8IYX8 460 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 KREMEN2Q8NCW0 462 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 FEZF2Q8TBJ5 459 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 HPS3Q969F9 1004 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 SUSD3Q96L08 255 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 MTRRQ9UBK8 725 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 DERAQ9Y315 318 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 BACE2Q9Y5Z0 518 aa16.33■□□□□ 0.2
PHGDH-231ENST00000641939 CCDC195A0A1B0GUA6 201 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 A0A1B0GVL5 298 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 ADAM12O43184 909 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 DCXO43602 365 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 SLFN14P0C7P3 912 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 PFKFB1P16118 471 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 GARTP22102 1010 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 SP100P23497 879 aaPredicted RBP16.32■□□□□ 0.2
PHGDH-231ENST00000641939 MCM4P33991 863 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 OR1D2P34982 312 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 AFMP43652 599 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 TMEM132DQ14C87 1099 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 FAM26FQ5R3K3 315 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 VARS2Q5ST30 1063 aaKnown RBP16.32■□□□□ 0.2
PHGDH-231ENST00000641939 SPATA1Q5VX52 437 aa16.32■□□□□ 0.2
PHGDH-231ENST00000641939 CRELD2Q6UXH1 353 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms