RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 SMARCD2Q92925 531 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 DDX27Q96GQ7 796 aaKnown RBP10.75□□□□□ -0.69
PHGDH-212ENST00000641247 LOXL4Q96JB6 756 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 TRIM6Q9C030 488 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-212ENST00000641247 CEP72Q9P209 647 aa10.75□□□□□ -0.69
PHGDH-212ENST00000641247 MYBPHLA2RUH7 354 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 M0R2N6 131 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 RPP40O75818 363 aaKnown RBP10.74□□□□□ -0.69
PHGDH-212ENST00000641247 EDN1P05305 212 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 P4HBP07237 508 aaKnown RBP10.74□□□□□ -0.69
PHGDH-212ENST00000641247 ARL2P36404 184 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 MPLP40238 635 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 CLCNKBP51801 687 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 SPIRE1Q08AE8 756 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 PPP2R5CQ13362 524 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 CCINQ13939 588 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 CTTNQ14247 550 aaKnown RBP10.74□□□□□ -0.69
PHGDH-212ENST00000641247 BECN1Q14457 450 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 PCBP1Q15365 356 aaKnown RBP eCLIP10.74□□□□□ -0.692e-6■■■□□ 14.6
PHGDH-212ENST00000641247 SLC27A1Q6PCB7 646 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 RTL10Q7L3V2 364 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 CACNA2D4Q7Z3S7 1137 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 C4orf19Q8IY42 314 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 ZNF461Q8TAF7 563 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 ZSCAN18Q8TBC5 510 aaPredicted RBP10.74□□□□□ -0.69
PHGDH-212ENST00000641247 TCP11Q8WWU5 503 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 GAB3Q8WWW8 586 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 ZFYVE19Q96K21 471 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 MTRQ99707 1265 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 GTSE1Q9NYZ3 720 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 BACE2Q9Y5Z0 518 aa10.74□□□□□ -0.69
PHGDH-212ENST00000641247 IGF2RP11717 2491 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 SPECC1L-ADORA2AF8WAN1 911 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 DCLK1O15075 740 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 MICAL2O94851 1124 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 LRG1P02750 347 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 THP07101 528 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 MLLT6P55198 1093 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-212ENST00000641247 POU5F1BQ06416 359 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 PON2Q15165 354 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 RABEP1Q15276 862 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 TEAD2Q15562 447 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 NPY5RQ15761 445 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 XKR9Q5GH70 373 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 SH3PXD2AQ5TCZ1 1133 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 NOSTRINQ8IVI9 506 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 CCDC12Q8WUD4 166 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-212ENST00000641247 DEPDC1BQ8WUY9 529 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 HAS1Q92839 578 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 KCNB2Q92953 911 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 DYDC2Q96IM9 177 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 LXNQ9BS40 222 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 TRPV4Q9HBA0 871 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 CYP4F11Q9HBI6 524 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 GOLGA2P5Q9HBQ8 144 aa10.73□□□□□ -0.69
PHGDH-212ENST00000641247 NAP1L2Q9ULW6 460 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-212ENST00000641247 WDR81Q562E7 1941 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 CDX4O14627 284 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-212ENST00000641247 TBX3O15119 743 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 RECQL4O94761 1208 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 B3GAT3O94766 335 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 SLITRK3O94933 977 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 CAPNS1P04632 268 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 ATF2P15336 505 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 CTHP32929 405 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 ARPP19P56211 112 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 LRRC32Q14392 662 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 EPHA7Q15375 998 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 PLK5Q496M5 336 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 GLRA4Q5JXX5 417 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 STXBP5Q5T5C0 1151 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 EEF1DP3Q658K8 133 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 SLC8B1Q6J4K2 584 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 KIAA1211LQ6NV74 962 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 PDXDC1Q6P996 788 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 PDZD4Q76G19 769 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-212ENST00000641247 TCEAL8Q8IYN2 117 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 SHKBP1Q8TBC3 707 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 BICD2Q8TD16 824 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 ZCCHC14Q8WYQ9 949 aaKnown RBP10.72□□□□□ -0.69
PHGDH-212ENST00000641247 CHFRQ96EP1 664 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 ZC3H10Q96K80 434 aaKnown RBP10.72□□□□□ -0.69
PHGDH-212ENST00000641247 MKNK1Q9BUB5 465 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 EDEM2Q9BV94 578 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 LRRC3Q9BY71 257 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 DUSP15Q9H1R2 295 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-212ENST00000641247 KCNMB3Q9NPA1 279 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 GPRC5CQ9NQ84 441 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 VPS45Q9NRW7 570 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 DDX25Q9UHL0 483 aaKnown RBP10.72□□□□□ -0.69
PHGDH-212ENST00000641247 PPME1Q9Y570 386 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 INSL5Q9Y5Q6 135 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 WDFY3Q8IZQ1 3526 aa10.72□□□□□ -0.69
PHGDH-212ENST00000641247 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 TMEM189-UBE2V1I3L0A0 370 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 ZNF197O14709 1029 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 CHADO15335 359 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 HYAL3O43820 417 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 VNN2O95498 520 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 MYL4P12829 197 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms