RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 LGR5O75473 907 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 CFHP08603 1231 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 MARK3P27448 753 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 TNFSF9P41273 254 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 NSFP46459 744 aaKnown RBP18.24■□□□□ 0.51
PHGDH-211ENST00000641213 EFNA5P52803 228 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 DRG2P55039 364 aaKnown RBP18.24■□□□□ 0.51
PHGDH-211ENST00000641213 NOP14P78316 857 aaKnown RBP18.24■□□□□ 0.51
PHGDH-211ENST00000641213 SIX1Q15475 284 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-211ENST00000641213 CYP1B1Q16678 543 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 Q3C1V9 767 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 HSDL1Q3SXM5 330 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 IER5Q5VY09 327 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 CCDC137Q6PK04 289 aaKnown RBP18.24■□□□□ 0.51
PHGDH-211ENST00000641213 TMEM270Q6UE05 265 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 EFCAB13Q8IY85 973 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 ANKRD13AQ8IZ07 590 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 MPHOSPH6Q99547 160 aaKnown RBP18.24■□□□□ 0.51
PHGDH-211ENST00000641213 TXLNGYQ9BZA5 131 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 TRIM7Q9C029 511 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 RBPJLQ9UBG7 517 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 CNTN6Q9UQ52 1028 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 UMODL1Q5DID0 1318 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 HMGB1P1B2RPK0 211 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-211ENST00000641213 ZBTB42B2RXF5 422 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 PPFIA2O75334 1257 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 TBXAS1P24557 533 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-211ENST00000641213 ZNF844Q08AG5 666 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 LAMTOR4Q0VGL1 99 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 CELF3Q5SZQ8 465 aaKnown RBP18.23■□□□□ 0.51
PHGDH-211ENST00000641213 EMC10Q5UCC4 262 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 CDCA2Q69YH5 1023 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-211ENST00000641213 SCARA3Q6AZY7 606 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 KDM7AQ6ZMT4 941 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 MON1BQ7L1V2 547 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.23■□□□□ 0.51
PHGDH-211ENST00000641213 PHLDB2Q86SQ0 1253 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 ZBTB33Q86T24 672 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 TRIM50Q86XT4 487 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 BRSK2Q8IWQ3 736 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 MTUS1Q9ULD2 1270 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 KCNH4Q9UQ05 1017 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 SNX24Q9Y343 169 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 GRIN2DO15399 1336 aa18.23■□□□□ 0.51
PHGDH-211ENST00000641213 GOLGA6L10A6NI86 522 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 RARAP10276 462 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 GNGT1P63211 74 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 NCOA4Q13772 614 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 C2CD6Q53TS8 623 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 LLGL2Q6P1M3 1020 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 KCNV1Q6PIU1 500 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 ABRAQ8N0Z2 381 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 MRPL4Q9BYD3 311 aaKnown RBP18.22■□□□□ 0.51
PHGDH-211ENST00000641213 RNF181Q9P0P0 153 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 DNAJC25-GNG10A0A024R161 153 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 PODXLO00592 558 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 PPFIA4O75335 1185 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 TOM1L1O75674 476 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 MYZAPP0CAP1 466 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 SRGAP2CP0DJJ0 459 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 GNA15P30679 374 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 COILP38432 576 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-211ENST00000641213 ATP1A2P50993 1020 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 MOGSQ13724 837 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 TTC19Q6DKK2 380 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-211ENST00000641213 TRIM72Q6ZMU5 477 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 RBBP8NLQ8NC74 664 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-211ENST00000641213 TCP11Q8WWU5 503 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 ACO2Q99798 780 aaKnown RBP18.22■□□□□ 0.51
PHGDH-211ENST00000641213 GRHL1Q9NZI5 618 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 PLXNA1Q9UIW2 1896 aa18.22■□□□□ 0.51
PHGDH-211ENST00000641213 IGKV6-21A0A0C4DH24 114 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 MYO1FO00160 1098 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 NOP56O00567 594 aaKnown RBP18.21■□□□□ 0.51
PHGDH-211ENST00000641213 EIF3HO15372 352 aaKnown RBP eCLIP18.21■□□□□ 0.51
PHGDH-211ENST00000641213 NR1D1P20393 614 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 PLTPP55058 493 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 NOMO3P69849 1222 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 MXD4Q14582 209 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-211ENST00000641213 ZDHHC24Q6UX98 284 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 PLPPR4Q7Z2D5 763 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 PASD1Q8IV76 773 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 C12orf50Q8NA57 414 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-211ENST00000641213 RNF149Q8NC42 400 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 CDCA5Q96FF9 252 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 TCHPQ9BT92 498 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 ATP8A1Q9Y2Q0 1164 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 A6NNZ2 444 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 FSCN2O14926 492 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 GAS2O43903 313 aaKnown RBP18.21■□□□□ 0.51
PHGDH-211ENST00000641213 ERLIN2O94905 339 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 CST3P01034 146 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-211ENST00000641213 PRKCBP05771 671 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 SSTR3P32745 418 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-211ENST00000641213 SLC1A1P43005 524 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 RPL21P46778 160 aaKnown RBP18.21■□□□□ 0.51
PHGDH-211ENST00000641213 AP3M2P53677 418 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 GRM1Q13255 1194 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 PPIL2Q13356 520 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms