RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 BEST2Q8NFU1 509 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 BADQ92934 168 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 C18orf25Q96B23 403 aaPredicted RBP9.46□□□□□ -0.9
HLA-B-258ENST00000640615 PDLIM2Q96JY6 352 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 ZMAT2Q96NC0 199 aaKnown RBP9.46□□□□□ -0.9
HLA-B-258ENST00000640615 TSPAN18Q96SJ8 248 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 TMEM161AQ9NX61 479 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 DPP3Q9NY33 737 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 IMPACTQ9P2X3 320 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 COQ4Q9Y3A0 265 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 DNAH12Q6ZR08 3092 aa9.46□□□□□ -0.9
HLA-B-258ENST00000640615 ABHD14A-ACY1A0A1B0GW23 586 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 PTGESO14684 152 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 EPHB6O15197 1021 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 LRRN2O75325 713 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 OFD1O75665 1012 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 VNN1O95497 513 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 CST3P01034 146 aaPredicted RBP9.45□□□□□ -0.9
HLA-B-258ENST00000640615 POMCP01189 267 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 ITGB3P05106 788 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 THP07101 528 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 PFKMP08237 780 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 SYN1P17600 705 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 DEKP35659 375 aaKnown RBP9.45□□□□□ -0.9
HLA-B-258ENST00000640615 SCNN1GP51170 649 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 GUCY2FP51841 1108 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 POLR2FP61218 127 aaKnown RBP9.45□□□□□ -0.9
HLA-B-258ENST00000640615 RBP5P82980 135 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 TBX2Q13207 712 aaPredicted RBP9.45□□□□□ -0.9
HLA-B-258ENST00000640615 PPIGQ13427 754 aaKnown RBP eCLIP9.45□□□□□ -0.9
HLA-B-258ENST00000640615 TRIM14Q14142 442 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 ZBTB6Q15916 424 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 LRIT3Q3SXY7 679 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 WDR44Q5JSH3 913 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 KLHDC7AQ5VTJ3 777 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 SCARA3Q6AZY7 606 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 GJB7Q6PEY0 223 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 TRIM65Q6PJ69 517 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 GLB1LQ6UWU2 654 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.45□□□□□ -0.95e-7■■■■□ 21.8
HLA-B-258ENST00000640615 CCDC186Q7Z3E2 898 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 CACNA2D4Q7Z3S7 1137 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 TMEM130Q8N3G9 435 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 C1orf127Q8N9H9 656 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 LMO3Q8TAP4 145 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 VWCEQ96DN2 955 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 PI4K2AQ9BTU6 479 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 IMPG2Q9BZV3 1241 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 ELAC1Q9H777 363 aaKnown RBP9.45□□□□□ -0.9
HLA-B-258ENST00000640615 SIX2Q9NPC8 291 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 IL23AQ9NPF7 189 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 PLCB1Q9NQ66 1216 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 RNF216Q9NWF9 866 aaPredicted RBP9.45□□□□□ -0.9
HLA-B-258ENST00000640615 MIOSQ9NXC5 875 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 TUBGCP4Q9UGJ1 667 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 ZMYND8Q9ULU4 1186 aaPredicted RBP9.45□□□□□ -0.9
HLA-B-258ENST00000640615 UBQLN1Q9UMX0 589 aaKnown RBP9.45□□□□□ -0.9
HLA-B-258ENST00000640615 AGAP1Q9UPQ3 857 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 INPP5FQ9Y2H2 1132 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 A0A0C4DFX4 3053 aa9.45□□□□□ -0.9
HLA-B-258ENST00000640615 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.44□□□□□ -0.9
HLA-B-258ENST00000640615 AKR1B15C9JRZ8 316 aaPredicted RBP9.44□□□□□ -0.9
HLA-B-258ENST00000640615 ZC3H11AO75152 810 aaKnown RBP eCLIP9.44□□□□□ -0.94e-6■■□□□ 13.4
HLA-B-258ENST00000640615 NOL4O94818 638 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 UPP2O95045 317 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 GYPCP04921 128 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 FGFR1P11362 822 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 UCHL3P15374 230 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 CYP3A5P20815 502 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 POLR2BP30876 1174 aaKnown RBP9.44□□□□□ -0.9
HLA-B-258ENST00000640615 CASP14P31944 242 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 AFF1P51825 1210 aaKnown RBP9.44□□□□□ -0.9
HLA-B-258ENST00000640615 GSDMDP57764 484 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 MYL6P60660 151 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 FPGSQ05932 587 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 GOLGA8FQ08AF8 430 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 GOLGA8DPQ0D2H9 430 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 SGSM1Q2NKQ1 1148 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 FIGNQ5HY92 759 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 CLLU1OSQ5K130 101 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 IQCEQ6IPM2 695 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 SPOPLQ6IQ16 392 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 PHLDB3Q6NSJ2 640 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 DPY19L2P1Q6NXN4 242 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 RRAGAQ7L523 313 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 ABI1Q8IZP0 508 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 GSTCDQ8NEC7 633 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 ZNF397Q8NF99 534 aaPredicted RBP9.44□□□□□ -0.9
HLA-B-258ENST00000640615 URGCPQ8TCY9 931 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 HELQQ8TDG4 1101 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 TATDN2Q93075 761 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 ELMO3Q96BJ8 720 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 IQCDQ96DY2 449 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 NT5C1BQ96P26 610 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 PPP1R10Q96QC0 940 aaKnown RBP9.44□□□□□ -0.9
HLA-B-258ENST00000640615 GANQ9H2C0 597 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 UBE2TQ9NPD8 197 aaPredicted RBP9.44□□□□□ -0.9
HLA-B-258ENST00000640615 NLRC4Q9NPP4 1024 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 SLC38A7Q9NVC3 462 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 CEP72Q9P209 647 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms