RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 NOC2LQ9Y3T9 749 aaKnown RBP8.9□□□□□ -0.98
PNKP-231ENST00000640501 GOLGB1Q14789 3259 aaKnown RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 MYO1FO00160 1098 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 THAP12O43422 761 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 PEX10O60683 326 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 HSF2BPO75031 334 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 HEXIM1O94992 359 aaKnown RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 ASS1P00966 412 aaKnown RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 MMEP08473 750 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 GNAT1P11488 350 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 PROZP22891 400 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 POLR2BP30876 1174 aaKnown RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 MAN1A1P33908 653 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 CPT1AP50416 773 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 RWDD2BP57060 319 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 IGBP1P78318 339 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 FMO1Q01740 532 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 CENPCQ03188 943 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 C1QBPQ07021 282 aaKnown RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 PPFIA1Q13136 1202 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 ZNF699Q32M78 642 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 DCAF4L1Q3SXM0 396 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 ALS2CLQ60I27 953 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 TMEM270Q6UE05 265 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 TRIM50Q86XT4 487 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 EFCAB13Q8IY85 973 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 RBBP8NLQ8NC74 664 aaPredicted RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 TMEM35BQ8NCS4 154 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 ZSWIM2Q8NEG5 633 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 FAM71BQ8TC56 605 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 NLRP7Q8WX94 980 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 SOCS4Q8WXH5 440 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 ZNF516Q92618 1163 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 TATDN2Q93075 761 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 CAVIN3Q969G5 261 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 CCDC102AQ96A19 550 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 LRRC45Q96CN5 670 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 FAM212AQ96EL1 285 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 ZBTB45Q96K62 511 aaPredicted RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 RNPC3Q96LT9 517 aaKnown RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 TSPAN18Q96SJ8 248 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 KRT12Q99456 494 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 NUP85Q9BW27 656 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 KATNAL1Q9BW62 490 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 FAM129AQ9BZQ8 928 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 MIS12Q9H081 205 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 OSGEPQ9NPF4 335 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 FAM114A2Q9NRY5 505 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 HOMER3Q9NSC5 361 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 PARP2Q9UGN5 583 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 FEZ2Q9UHY8 353 aaPredicted RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 TMEM59LQ9UK28 342 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 ZHX1Q9UKY1 873 aaPredicted RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 STRIP2Q9ULQ0 834 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 PACSIN2Q9UNF0 486 aaPredicted RBP8.89□□□□□ -0.99
PNKP-231ENST00000640501 CNTN6Q9UQ52 1028 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 TELO2Q9Y4R8 837 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 ALG6Q9Y672 507 aa8.89□□□□□ -0.99
PNKP-231ENST00000640501 MCM3APO60318 1980 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 NRCAMQ92823 1304 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 TRPM7Q96QT4 1865 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 GOLGA6BA6NDN3 693 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 FAM187AA6NFU0 413 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 A6NNZ2 444 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 ZBTB42B2RXF5 422 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 PODXLO00592 558 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 KPNA6O60684 536 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 FGGP02679 453 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 RPLP2P05387 115 aaKnown RBP8.88□□□□□ -0.99
PNKP-231ENST00000640501 MMP3P08254 477 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 HOXD8P13378 290 aaPredicted RBP8.88□□□□□ -0.99
PNKP-231ENST00000640501 DESP17661 470 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 CHRNB2P17787 502 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 CTNNA2P26232 953 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 CHRNA3P32297 505 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 ADCYAP1R1P41586 468 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 HUNKP57058 714 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 SNX16P57768 344 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 TFAMQ00059 246 aaKnown RBP8.88□□□□□ -0.99
PNKP-231ENST00000640501 GUCY2DQ02846 1103 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 MBTD1Q05BQ5 628 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 SREBF2Q12772 1141 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 MTMR3Q13615 1198 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 MESDQ14696 234 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 GRIK4Q16099 956 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 TUBB8Q3ZCM7 444 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 ODF2Q5BJF6 829 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 ZNF667Q5HYK9 610 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 MTHFD1LQ6UB35 978 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 THNSL1Q8IYQ7 743 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 AFG1LQ8WV93 481 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 KAT5Q92993 513 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 MS4A14Q96JA4 679 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 ZSWIM1Q9BR11 485 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 PI4K2AQ9BTU6 479 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 GCOM2Q9BZD3 368 aaPredicted RBP8.88□□□□□ -0.99
PNKP-231ENST00000640501 AP5M1Q9H0R1 490 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 GDF3Q9NR23 364 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 PDGFCQ9NRA1 345 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 PARVAQ9NVD7 372 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms