RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 KIAA0100Q14667 2235 aaKnown RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 GOLGA6L3A6NEY3 463 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 GCNT3O95395 438 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 MYBP10242 640 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 MAPTP10636 758 aaKnown RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 GLRA2P23416 452 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 NPTX2P47972 431 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ACLYP53396 1101 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ADAM17P78536 824 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 PAK1Q13153 545 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 DMP1Q13316 513 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 CBX2Q14781 532 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 NCAPHQ15003 741 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 TLR1Q15399 786 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 PKN2Q16513 984 aaKnown RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 IER5Q5VY09 327 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 FBXW10Q5XX13 1052 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 EFCAB12Q6NXP0 572 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 MTHFD1LQ6UB35 978 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF720Q7Z2F6 126 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 DHX40Q8IX18 779 aaKnown RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 AOPEPQ8N6M6 819 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 LINC01465Q8N7H1 131 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ENOX1Q8TC92 643 aaKnown RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ASAP3Q8TDY4 903 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 PPP1R13LQ8WUF5 828 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 TCP11Q8WWU5 503 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 NELFBQ8WX92 580 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 DHTKD1Q96HY7 919 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 NTPCRQ9BSD7 190 aaKnown RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 STRA6Q9BX79 667 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 SUGCTQ9HAC7 445 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 FEZ2Q9UHY8 353 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 RWDD2AQ9UIY3 292 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 CTNND2Q9UQB3 1225 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ADGRA3Q8IWK6 1321 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 MBLAC1A4D2B0 266 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 K7ENM7 598 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 EIF3DO15371 548 aaKnown RBP eCLIP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 FAM163BP0C2L3 166 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 FAM153BP0C7A2 387 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 CCL5P13501 91 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 HOXC8P31273 242 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 HOXD13P35453 343 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 NAMPTP43490 491 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 CLCN3P51790 818 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 NCKAP1LP55160 1127 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 MYL5Q02045 173 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 LONRF2Q1L5Z9 754 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 BMT2Q1RMZ1 405 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 GFOD2Q3B7J2 385 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ZC2HC1CQ53FD0 456 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 CENPPQ6IPU0 288 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ERAP2Q6P179 960 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 VASH1Q7L8A9 365 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 NECAB2Q7Z6G3 386 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 TTC30BQ8N4P2 665 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 METTL13Q8N6R0 699 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 C7orf31Q8N865 590 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ARRDC4Q8NCT1 418 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF507Q8TCN5 953 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 PRPF31Q8WWY3 499 aaKnown RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 PSPC1Q8WXF1 523 aaKnown RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 IFT74Q96LB3 600 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 KIFC3Q9BVG8 833 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 LRRC3Q9BY71 257 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 RSPH9Q9H1X1 276 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 SEMA6BQ9H3T3 888 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 ST6GALNAC4Q9H4F1 302 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 SUCLA2Q9P2R7 463 aaPredicted RBP8.7□□□□□ -1.02
SCARB2-220ENST00000640076 HDAC6Q9UBN7 1215 aa8.7□□□□□ -1.02
SCARB2-220ENST00000640076 UBE4BO95155 1302 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 CCDC169A6NNP5 214 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 BECN2A8MW95 431 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 IKBKBO14920 756 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 SLC16A4O15374 487 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 CABYRO75952 493 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 PRPF6O94906 941 aaKnown RBP8.69□□□□□ -1.02
SCARB2-220ENST00000640076 KIF20AO95235 890 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 CCNE1P24864 410 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 DNM2P50570 870 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 PMS1P54277 932 aaKnown RBP8.69□□□□□ -1.02
SCARB2-220ENST00000640076 STX17P56962 302 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 LAMTOR4Q0VGL1 99 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 ALCAMQ13740 583 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 MXD4Q14582 209 aaPredicted RBP8.69□□□□□ -1.02
SCARB2-220ENST00000640076 L1TD1Q5T7N2 865 aaKnown RBP8.69□□□□□ -1.02
SCARB2-220ENST00000640076 TTI2Q6NXR4 508 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 NFRKBQ6P4R8 1299 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 STXBP4Q6ZWJ1 553 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 HAUS6Q7Z4H7 955 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 SLC17A8Q8NDX2 589 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 TMEM161BQ8NDZ6 487 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 P2RX5Q93086 422 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 ZNF333Q96JL9 665 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 DEFB118Q96PH6 123 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
SCARB2-220ENST00000640076 RNF208Q9H0X6 261 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 KCTD10Q9H3F6 313 aa8.69□□□□□ -1.02
SCARB2-220ENST00000640076 KMT5AQ9NQR1 393 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms