RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 NAMPTP43490 491 aa20.2■□□□□ 0.82
CROCCP2-206ENST00000639594 C1orf54Q8WWF1 131 aa20.2■□□□□ 0.82
CROCCP2-206ENST00000639594 TLCD1Q96CP7 247 aa20.2■□□□□ 0.82
CROCCP2-206ENST00000639594 SEMA4AQ9H3S1 761 aa20.2■□□□□ 0.82
CROCCP2-206ENST00000639594 LRRC19Q9H756 370 aa20.2■□□□□ 0.82
CROCCP2-206ENST00000639594 RBAKQ9NYW8 714 aaPredicted RBP20.2■□□□□ 0.82
CROCCP2-206ENST00000639594 PARP2Q9UGN5 583 aa20.2■□□□□ 0.82
CROCCP2-206ENST00000639594 PIGRP01833 764 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 CYP1A1P04798 512 aaPredicted RBP20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 GBP1P32455 592 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 FNTAP49354 379 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 SLC29A2Q14542 456 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 DENND2CQ68D51 928 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 ANKRD35Q8N283 1001 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 DNERQ8NFT8 737 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 RUNDC3BQ96NL0 473 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 SRRM3A6NNA2 597 aaPredicted RBP20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 SSTR3P32745 418 aaPredicted RBP20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 BPIFB4P59827 614 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 MKRN4PQ13434 485 aaPredicted RBP20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 B4GALNT4Q76KP1 1039 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 ART4Q93070 314 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 MSTO1Q9BUK6 570 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 NIFKQ9BYG3 293 aaKnown RBP20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 FAM107BQ9H098 131 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 ANKFY1Q9P2R3 1169 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 MTRF1LQ9UGC7 380 aaKnown RBP20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 FBXO40Q9UH90 709 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 PASKQ96RG2 1323 aa20.19■□□□□ 0.82
CROCCP2-206ENST00000639594 NSFP46459 744 aaKnown RBP20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 ALDH5A1P51649 535 aaPredicted RBP20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 CENPCQ03188 943 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 SNX1Q13596 522 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 CUL2Q13617 745 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 NOL9Q5SY16 702 aaKnown RBP20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 DAB2IPQ5VWQ8 1189 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 SLFN12LQ6IEE8 588 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 MON1BQ7L1V2 547 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 CHST13Q8NET6 341 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 KCNN1Q92952 543 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 PCYT2Q99447 389 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 ADARB2Q9NS39 739 aaKnown RBP20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 PCDHB4Q9Y5E5 795 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 IGKV6D-21A0A0A0MT36 114 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 GSTTP1A0A1W2PQM5 241 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 MYBL1P10243 752 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 SEZ6Q53EL9 994 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 SGO2Q562F6 1265 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 TREML2Q5T2D2 321 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 SCARA3Q6AZY7 606 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 HOOK3Q86VS8 718 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 PASD1Q8IV76 773 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 SLC7A3Q8WY07 619 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 HERPUD2Q9BSE4 406 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 PLVAPQ9BX97 442 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 MAF1Q9H063 256 aa20.18■□□□□ 0.82
CROCCP2-206ENST00000639594 UMODL1Q5DID0 1318 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 A0A0B4J269 797 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 ECEL1O95672 775 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 FAM107AO95990 144 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 UBA1P22314 1058 aaKnown RBP20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 SH3D19Q5HYK7 790 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 TMEM270Q6UE05 265 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 OR5B17Q8NGF7 314 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 TRIM11Q96F44 468 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 ADGRA2Q96PE1 1338 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 CNTNAP2Q9UHC6 1331 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 A0A087WUV0 522 aaPredicted RBP20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 LDHAP00338 332 aaKnown RBP20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 FGFR4P22455 802 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 PPP1R7Q15435 360 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 UHMK1Q8TAS1 419 aaKnown RBP20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 CGRRF1Q99675 332 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 CHST7Q9NS84 486 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 BTBD7Q9P203 1132 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 NUB1Q9Y5A7 615 aa20.17■□□□□ 0.82
CROCCP2-206ENST00000639594 MGAMO43451 1857 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 TLDC2A0PJX2 215 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 GMNCA6NCL1 334 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 TRAPPC3O43617 180 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 USP2O75604 605 aaPredicted RBP20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 SLC1A1P43005 524 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 KRT17Q04695 432 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 CAPSQ13938 189 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 GPR162Q16538 588 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 ATG4AQ8WYN0 398 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 DDX27Q96GQ7 796 aaKnown RBP20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 C11orf70Q9BRQ4 267 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 PAGR1Q9BTK6 254 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 A0A0G2JMZ2 1700 aa20.16■□□□□ 0.82
CROCCP2-206ENST00000639594 TTLL13PA6NNM8 815 aa20.15■□□□□ 0.82
CROCCP2-206ENST00000639594 ADM5C9JUS6 153 aa20.15■□□□□ 0.82
CROCCP2-206ENST00000639594 FARP2O94887 1054 aaPredicted RBP20.15■□□□□ 0.82
CROCCP2-206ENST00000639594 CLTAP09496 248 aa20.15■□□□□ 0.82
CROCCP2-206ENST00000639594 HARSP12081 509 aaKnown RBP20.15■□□□□ 0.82
CROCCP2-206ENST00000639594 GNA15P30679 374 aa20.15■□□□□ 0.82
CROCCP2-206ENST00000639594 NOMO3P69849 1222 aa20.15■□□□□ 0.82
CROCCP2-206ENST00000639594 DRP2Q13474 957 aa20.15■□□□□ 0.82
CROCCP2-206ENST00000639594 TARBP2Q15633 366 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms