RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 CGRRF1Q99675 332 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 AGPAT1Q99943 283 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 CAPN10Q9HC96 672 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 BLOC1S4Q9NUP1 217 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 PARVAQ9NVD7 372 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 DDX56Q9NY93 547 aaKnown RBP5.88□□□□□ -1.47
CHD2-227ENST00000637572 XIRP1Q702N8 1843 aaKnown RBP5.88□□□□□ -1.47
CHD2-227ENST00000637572 MROH7Q68CQ1 1323 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 RBM47A0AV96 593 aaKnown RBP5.88□□□□□ -1.47
CHD2-227ENST00000637572 MCF2LO15068 1137 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 SRGAP2BP0DMP2 458 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 KCNA3P22001 575 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 IGFBP4P22692 258 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 GCGRP47871 477 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 ACOT2P49753 483 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 RNASE9P60153 205 aaKnown RBP5.88□□□□□ -1.47
CHD2-227ENST00000637572 RBM10P98175 930 aaKnown RBP5.88□□□□□ -1.47
CHD2-227ENST00000637572 CDK17Q00537 523 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 GLE1Q53GS7 698 aaKnown RBP5.88□□□□□ -1.47
CHD2-227ENST00000637572 RASGRP2Q7LDG7 609 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 ANKMY2Q8IV38 441 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 SLC35F6Q8N357 371 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 NKX2-3Q8TAU0 364 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 CYP2W1Q8TAV3 490 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 COLEC11Q9BWP8 271 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 NT5C1AQ9BXI3 368 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 C4AP0C0L4 1744 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 MARF1Q9Y4F3 1742 aaKnown RBP5.88□□□□□ -1.47
CHD2-227ENST00000637572 IRS2Q9Y4H2 1338 aa5.88□□□□□ -1.47
CHD2-227ENST00000637572 GOLGA8SH3BPF8 625 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 TEX33O43247 280 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 MAFO75444 373 aaPredicted RBP5.87□□□□□ -1.47
CHD2-227ENST00000637572 PARNO95453 639 aaKnown RBP5.87□□□□□ -1.47
CHD2-227ENST00000637572 HLA-DRAP01903 254 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 ITGB5P18084 799 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 SDC4P31431 198 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 THPOP40225 353 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 NOP14P78316 857 aaKnown RBP5.87□□□□□ -1.47
CHD2-227ENST00000637572 CDKAL1Q5VV42 579 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 C4orf50Q6ZRC1 276 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 C1orf186Q6ZWK4 172 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 OTUD6BQ8N6M0 293 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 USP38Q8NB14 1042 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 MED15Q96RN5 788 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 METRNQ9UJH8 293 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 SNED1Q8TER0 1413 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 CNTNAP1P78357 1384 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 TJP3O95049 919 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 HMGCRP04035 888 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 PSMA2P25787 234 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 ALDH3A1P30838 453 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 SOX11P35716 441 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 COG7P83436 770 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 MAP3K10Q02779 954 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 SNX17Q15036 470 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 KLHDC7AQ5VTJ3 777 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 SLC9A9Q8IVB4 645 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 KLHL7Q8IXQ5 586 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 PPP1R14CQ8TAE6 165 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 MBOAT7Q96N66 472 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 ZNF518BQ9C0D4 1074 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 TRPV6Q9H1D0 765 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 WNT8AQ9H1J5 351 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 PCDHB7Q9Y5E2 793 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 PAPPAQ13219 1627 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 PHF20L1A8MW92 1017 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 H0YHG0 523 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 M0QYV0 167 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 TADA2AO75478 443 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 CTSHP09668 335 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 ZFXP17010 805 aaPredicted RBP5.87□□□□□ -1.47
CHD2-227ENST00000637572 CYP2C19P33261 490 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 NOVP48745 357 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 CLCN3P51790 818 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 NR1H3Q13133 447 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 PKN2Q16513 984 aaKnown RBP5.87□□□□□ -1.47
CHD2-227ENST00000637572 SLC27A1Q6PCB7 646 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 CCDC25Q86WR0 208 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 ACRBPQ8NEB7 543 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 HPS3Q969F9 1004 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 DDX50Q9BQ39 737 aaKnown RBP5.87□□□□□ -1.47
CHD2-227ENST00000637572 POLD4Q9HCU8 107 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 SPTLC3Q9NUV7 552 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 VTI1BQ9UEU0 232 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 DDX41Q9UJV9 622 aaKnown RBP5.87□□□□□ -1.47
CHD2-227ENST00000637572 CPSF3Q9UKF6 684 aaKnown RBP5.87□□□□□ -1.47
CHD2-227ENST00000637572 ITGA11Q9UKX5 1188 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 PYCARDQ9ULZ3 195 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 ZNF148Q9UQR1 794 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 TRPV2Q9Y5S1 764 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 SIPA1L3O60292 1781 aaPredicted RBP5.87□□□□□ -1.47
CHD2-227ENST00000637572 TJP1Q07157 1748 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 GRID2IPA4D2P6 1211 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 H7C4K7 107 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 EML1O00423 815 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 TLR2O60603 784 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 ZRANB2O95218 330 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHD2-227ENST00000637572 NPTXRO95502 500 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 KRT1P04264 644 aa5.87□□□□□ -1.47
CHD2-227ENST00000637572 ODC1P11926 461 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms